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Protein Overview: RNF10

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..207] MSA 3.728987 View MSA. No confident structure predictions are available.
2 View Details [208..335] PSI-BLAST 13.0 RAG1 DIMERIZATION DOMAIN
3 View Details [336..502] MSA 2.619994 View MSA. No confident structure predictions are available.
4 View Details [503..626] MSA 1.189984 View MSA. No confident structure predictions are available.
5 View Details [627..811] FFAS03 1.17 No description for 2fj7I was found.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • protein binding
  • 2.64803540957326 bayes_pls_golite062009
  • binding
  • 2.14721962003828 bayes_pls_golite062009
  • transcription regulator activity
  • 1.68475305605912 bayes_pls_golite062009
  • nucleic acid binding
  • 1.14817467304431 bayes_pls_golite062009
  • DNA binding
  • 1.04821660471647 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 0.628952571387495 bayes_pls_golite062009
  • transcription activator activity
  • 0.546784009980947 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 0.491915833175877 bayes_pls_golite062009
  • chromatin binding
  • 0.48807894940058 bayes_pls_golite062009
  • ligase activity
  • 0.34187399168736 bayes_pls_golite062009
  • transcription factor activity
  • 0.256724934540426 bayes_pls_golite062009
  • transcription factor binding
  • 0.25479994691323 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 0.15369897412662 bayes_pls_golite062009
  • catalytic activity
  • 0.14112008370434 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.017536022609566 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle