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Protein Overview: YCJO_ECOLI

General Information:
Name(s) found: YCJO_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|84027910|sp|P0AFR7.1|YCJO_ECOLI RecName: Full=Inner membrane ABC transporter permease protein ycjO [NCBI NR]
  • pir||B64880 probable multiple sugar transport protein b1311 precursor - Escherichia coli (strain K-12) [NCBI NR]
  • gi|1742149|dbj|BAA14887.1| predicted sugar transporter subunit [Escherichia coli W3110] [NCBI NR]
  • Inner membrane ABC transporter permease protein ycjO - Escherichia coli [Swiss-Prot]
  • putative binding-protein dependent transport protein; putative transport protein (ABC superfamily, membrane) [Escherichia coli K12]gi|30062831|ref|NP_837002.1| putative binding-protein dependent transport protein [Shigella flexneri 2a str. 2457T]gi|2411 [nrdb_11152004_Chlamydomonas]
  • Inner membrane ABC transporter permease protein ycjO [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Inner membrane ABC transporter permease protein ycjO OS=Escherichia coli (strain K12) GN=ycjO PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Inner membrane ABC transporter permease protein YcjO OS=Escherichia coli (strain K12) GN=ycjO PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 293 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRLFSGRSD MPFALLLLAP SLLLLGGLVA WPMVSNIEIS FLRLPLNPNI ESTFVGVSNY  60
   61 VRILSDPGFW HSLWMTVWYT ALVVAGSTVL GLAVAMFFNR EFRLRKTARS LVILSYVTPS 120
  121 ISLVFAWKYM FNNGYGIVNY LGVDLLHLYE QAPLWFDNPG SSFVLVVLFA IWRYFPYAFI 180
  181 SFLAILQTID KSLYEAAEMD GANAWQRFRI VTLPAIMPVL ATVVTLRTIW MFYMFADVYL 240
  241 LTTKVDILGV YLYKTAFAFN DLGKAAAISV VLFIIIFAVI LLTRKRVNLN GNK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..293] PSI-BLAST 20.0 No description for 2onkC was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  2.92901170384371 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.82231503501622 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  2.62912035749387 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  2.58567076459772 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  2.58112472232827 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  2.57722913421807 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  2.57722913421807 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  2.57687258170314 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  2.26533438516544 bayes_pls_golite062009
  • ATPase activity
    		•  2.12523930663356 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.08705004234574 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  2.06571106810861 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.02843508794757 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.01869168199434 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.01800287925825 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.98824613202602 bayes_pls_golite062009
  • hydrolase activity
    		•  1.27489880499396 bayes_pls_golite062009
  • catalytic activity
    		•  0.79821499476005 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.67039520089395 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  0.56369901852468 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  0.44915416750675 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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