General Information: |
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Name(s) found: |
SO1197
[shew_pnnl_plus_contams_psm.fasta]
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Description(s) found: |
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Organism: | Shewanella oneidensis |
Length: | 649 amino acids |
Gene Ontology: |
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Cellular Component: | NONE FOUND |
Biological Process: | NONE FOUND |
Molecular Function: | NONE FOUND |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MAKNLILWVV IAVVLMSVFQ GYSPSSSSSQ KMDYSTFLDN VRDGQVATVE VKSDQRTIEG 60 61 SKRTGEKFTT IMPLYDQDLI NDLDRKGITM KGQEAEESGF LTQIFISWFP MLLLIGVWIF 120 121 FMRQMQGGGG KGAMSFGKSK AKLMSEDQIK TTFADVAGCD EAKEEVKELV DYLRDPTKFQ 180 181 KLGGRIPTGV LMVGPPGTGK TLLAKAIAGE SKVPFFTISG SDFVEMFVGV GASRVRDMFE 240 241 QAKKSAPCII FIDEIDAVGR QRGAGLGGGH DEREQTLNQM LVEMDGFEGN EGIIVIAATN 300 301 RPDVLDSALL RPGRFDRQVV VGLPDVRGRE QILKVHMRKV PLSEDVKASV IARGTPGFSG 360 361 ADLANLVNEA ALFAARGNRR VVGMEEFERA KDKIMMGAER RSMVMSEAEK EMTAYHEAGH 420 421 AIVGCLVPEH DPVHKVTIIP RGRALGVTFF LPEADAISQS RRKLESQISV AYGGRLAEEL 480 481 IYGTEKVSTG ASQDIKYATS IARNMVTQWG FSDKLGPLLY AEEEGEVFLG RSMGKAKAMS 540 541 DETATLIDTE VKAFIDKNYS RAKQILQDNV DILHSMKDAL MKYETIDSLQ IDDLMNRREV 600 601 RQPADWQADE NGSNDKGNGK GEPAVKVDEV VKSAPAEAEL KDADESPVK |
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..141] | 26.075721 | No description for PF06480.6 was found. No confident structure predictions are available. | |
2 | View Details | [142..649] | 111.0 | EDTA treated |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||||||||||||||||||||||||||||||||||||||
1 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||
2 |
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Source: Reynolds et al. 2008. Manuscript submitted |