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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SO1197
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNLILWVV IAVVLMSVFQ GYSPSSSSSQ KMDYSTFLDN VRDGQVATVE VKSDQRTIEG  60
   61 SKRTGEKFTT IMPLYDQDLI NDLDRKGITM KGQEAEESGF LTQIFISWFP MLLLIGVWIF 120
  121 FMRQMQGGGG KGAMSFGKSK AKLMSEDQIK TTFADVAGCD EAKEEVKELV DYLRDPTKFQ 180
  181 KLGGRIPTGV LMVGPPGTGK TLLAKAIAGE SKVPFFTISG SDFVEMFVGV GASRVRDMFE 240
  241 QAKKSAPCII FIDEIDAVGR QRGAGLGGGH DEREQTLNQM LVEMDGFEGN EGIIVIAATN 300
  301 RPDVLDSALL RPGRFDRQVV VGLPDVRGRE QILKVHMRKV PLSEDVKASV IARGTPGFSG 360
  361 ADLANLVNEA ALFAARGNRR VVGMEEFERA KDKIMMGAER RSMVMSEAEK EMTAYHEAGH 420
  421 AIVGCLVPEH DPVHKVTIIP RGRALGVTFF LPEADAISQS RRKLESQISV AYGGRLAEEL 480
  481 IYGTEKVSTG ASQDIKYATS IARNMVTQWG FSDKLGPLLY AEEEGEVFLG RSMGKAKAMS 540
  541 DETATLIDTE VKAFIDKNYS RAKQILQDNV DILHSMKDAL MKYETIDSLQ IDDLMNRREV 600
  601 RQPADWQADE NGSNDKGNGK GEPAVKVDEV VKSAPAEAEL KDADESPVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle