General Information: |
|
Name(s) found: |
YER160C
[SGD]
|
Description(s) found:
Found 2 descriptions. SHOW ALL |
|
Organism: | Saccharomyces cerevisiae |
Length: | 1753 amino acids |
Gene Ontology: |
|
Cellular Component: |
retrotransposon nucleocapsid
[ISS![]() |
Biological Process: |
transposition, RNA-mediated
[ISS![]() |
Molecular Function: |
DNA-directed DNA polymerase activity
[ISS![]() RNA-directed DNA polymerase activity [ISS ![]() RNA binding [ISS ![]() protein binding [ISS ![]() ribonuclease activity [ISS ![]() peptidase activity [ISS ![]() |
Sequence: |
|
Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MESQQLSNYP HISHGSACAS VTSKEVHTNQ DPLDVSASKI QEYDKASTKA NSQQTTTPAS 60 61 SAVPENPHHA SPQPASVPPP QNGPYPQQCM MTQNQANPSG WSFYGHPSMI PYTPYQMSPM 120 121 YFPPGPQSQF PQYPSSVGTP LSTPSPESGN TFTDSSSADS DMTSTKKYVR PPPMLTSPND 180 181 FPNWVKTYIK FLQNSNLGGI IPTVNGKPVR QITDDELTFL YNTFQIFAPS QFLPTWVKDI 240 241 LSVDYTDIMK ILSKSIEKMQ SDTQEANDIV TLANLQYNGS TPADAFETKV TNIIDRLNNN 300 301 GIHINNKVAC QLIMRGLSGE YKFLRYTRHR HLNMTVAELF LDIHAIYEEQ QGSRNSKPNY 360 361 RRNPSDEKND SRSYTNTTKP KVIARNPQKT NNSKSKTARA HNVSTSNNSP STDNDSISKS 420 421 TTEPIQLNNK HDLHLRPETY *IYSKSY*SF ***TPWTPPS RFRSITNPYK ICSSHTLSII 480 481 *S*HKRS*CS KKKYTN*RYW *PTISLPGQH QNINKGIAHS *HSL*LTQFE *IGCSRYHSM 540 541 LYQKRLRTV* RHCTCTYRKI WRLLLGI*KV LASIKYLRTH HQ*CPYK*KY TQISLSFHSS 600 601 NACTCQCTDN SILT*K*HHH VF*RIRCRLV *CY*LSMS*L FNRQKHQTQT YQRFTTKIPK 660 661 FIRTLSIPTY *HIWSSSQPT KKCTILFHLI Y**DNKIPLG LSITRPSRGL YPRCFYYDTS 720 721 FY*KPVSGQC LGYTNGPWF* VY*QNSP*IP *KKWYNSMLY NHSGFPSTWS R*TAQPYLIR 780 781 *LPYSTAM*W FTEPFMVLCN RIFYYCEKFT SFT*KQKICK TTCWLGRT*Y QYFVTFRSTC 840 841 YRQ*SQP*LQ NTSSWHPRLR STSVSKLLWI YHLSSVLKED SRYN*LCYSS GQGIQIRSIQ 900 901 LRRTHFR*RL KPFNCFISFV HCVK*DPTIQ *S*HRI*P*L PI*H*TTS*A TEKCPFKSCE 960 961 SNRFHTSVNS Y*RFETCFQN QYSRTQRS*P QHI*I*YSSI *EEI*HPPNF RYREYRFGWY1020 1021 A*IRCSFTCS HVPI*HT*VV ARQ*I*RFQT LRLVQ*Q*D* SYKRTNIQYG WYQ**NCSAD1080 1081 KRTGD*EKDH TPFTFDRYFL IRK*FTTPRR SYQNVRYLS* GEYRGIYYR* SSTPRSASRT1140 1141 SYRIIRLL*R TPTDKFSSN* FQFGWYW*L* CLYYYQQ*EK IIRR**N*N* GITRHMEY*E1200 1201 YA*FRTSEIE ETNSPDCSCK SSKINQTNTN NLTIR*GNHL **RY*RKRKI YPGIPQRSQS1260 1261 TVEDENLGH* QIL*QKRNRP QKSNKFNVYL *QET*RYS*S *ICCKR*YST S*HLRPRHAI1320 1321 QYRTSLCIND IPVTCIRQ*L LYYTIRHIFG IFVCRHQRRT IHKTSTTFRN E**VNTFEEI1380 1381 TLWIETKWSE LVRNYQIIPD KTVWYGRSSW MVMRI*E*SS NNLLIR**YD IVQQRLKCKE1440 1441 NHNNTQETIR YKDNKSG*K* *RNSVRHTWL RNQISKR*IH EIRYGKLIN* KNTQTKRTFE1500 1501 PKRKET*RSR STRSIYRPAR TRARRR*LQN EGT*NAKADR SSIICWI*I* I*PIILHQHT1560 1561 CTTYTISVQA SVRYDI*IDT VHMEYER*AI NMAQKQTC*A NK*ISCYKRC IVW*PTVLIT1620 1621 NWQHIFT*WK SNWRKVHQGF INMYFNYGSR NTRDK*ICPI IK*PQSPCAR T*QETNYRIT1680 1681 NRQ*IYNQYN YIQ**REI*K QIFWY*SNET KR*SIRKSSA RMLYRNQKEY CRRNDQTSSD1740 1741 KNIQTINKQM DSL |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | No Comments | Hazbun TR, et al. (2003) | |
View Run | No Comments | Hazbun TR, et al. (2003) | |
View Run | No Comments | Hazbun TR, et al. (2003) | |
View Run | No Comments | Hazbun TR, et al. (2003) | |
View Run | No Comments | Reinke A, et al. (2004) | |
View Run | No Comments | Reinke A, et al. (2004) | |
View Run | No Comments | Reinke A, et al. (2004) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
New Feature: Upload Your Own Microscopy Data
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.97 |
Source: Reynolds et al. (2008)