General Information: |
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Name(s) found: |
YDR316W-B
[SGD]
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Description(s) found:
Found 2 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 1754 amino acids |
Gene Ontology: |
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Cellular Component: |
retrotransposon nucleocapsid
[ISS![]() |
Biological Process: |
transposition, RNA-mediated
[ISS![]() |
Molecular Function: |
DNA-directed DNA polymerase activity
[ISS![]() RNA-directed DNA polymerase activity [ISS ![]() RNA binding [ISS ![]() protein binding [ISS ![]() ribonuclease activity [ISS ![]() peptidase activity [ISS ![]() |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MESQQLSNYP HISHGSACAS VTSKEVHTNQ DPLDVSASKI QEYDKASTKA NSQQTTTPAS 60 61 SAVPENPHHA SPQPASVPPP QNGPYPQQCM MTQNQANPSG WSFYGHPSMI PYTPYQMSPM 120 121 YFPPGPQSQF PQYPSSVGTP LSTPSPESGN TFTDSSSADS DMTSTKKYVR PPPMLTSPND 180 181 FPNWVKTYIK FLQNSNLGGI IPTVNGKPVR QITDDELTFL YNTFQIFAPS QFLPTWVKDI 240 241 LSVDYTDIMK ILSKSIEKMQ SDTQEANDIV TLANLQYNGS TPADAFETKV TNIIDRLNNN 300 301 GIHINNKVAC QLIMRGLSGE YKFLRYTRHR HLNMTVAELF LDIHAIYEEQ QGSRNSKPNY 360 361 RRNPSDEKND SRSYTNTTKP KVIARNPQKT NNSKSKTARA HNVSTSNNSP STDNDSISKS 420 421 TTEPIQLNNK HDLHLRPETY *IYSKSY*SF ***TPWTPPS RFRSITNPYK ICSSHTLSII 480 481 *S*HKRS*CS KKKYTN*RYW *PTISLPGQH QNINKGIAHS *HSL*LTQFE *IGCSRYHSM 540 541 LYQKRLRTV* RHCTCTYRKI WRLLLGI*KV LASIKYLRTH HQ*CPYK*KY TQISLSFHSS 600 601 NACACQCTDN SILT*K*HHH VF*RIRCRLV *CY*LSMS*L FNRQKHQTQT YQRFTTKIPK 660 661 FIRTLSIPTY *HIWSSSQPT K*CTILFHLI Y**DNKIPLG LSITRPSRGL YPRCFYYDTS 720 721 FY*KPVSGQC LGYTNGPWF* VY*QNSP*IP *KKWYNSMLY NHSGFPSTWS R*TAKPYLIR 780 781 *LPYSTAM*W FTEPFMVLCN RIFYYCEKFT SFT*KQKICK TTCWLGRT*Y QYFVTFRSTC 840 841 YRQ*SQP*LQ NTSSWHPRLR STSVSKLLWI YHLSSILKED SRYN*LCYSS GQGIQIRSIQ 900 901 LRRTHFR*RL KPFNCFISFV HCVK*DPRIQ *S*HRI*P*L PIRH*TTS*A TEKCPFKSCE 960 961 SNRFHTSVNS Y*RFETCF*N QYSRTQRS*P QHI*I*YSSI KEEI*HPPNF QYREYRFGWY1020 1021 A*IKCSFTCS HVPI*HT*VV ARQ*I*RFQT LRLVQ*K*D* SYKRTNIQYG WYQQQNCSAD1080 1081 K*PRD*EKDY TPFTFNRCFS TGK*FIAQYC SYQNANYCF* TEYRGIYHR* SPTP*STSRI1140 1141 SYRIP*PI*R TPTDKFSSN* FQFGWYW*L* CLYYYQQ*EK IIRR**N*N* GITRHMEY*E1200 1201 YA*FRTSEIE ETNSPDCSCK SSKINQTNTD NLKIR*GNHL **RY*RKGKI YRSIPQRSQP1260 1261 TIENEYLGH* QIL*QKRNRP *KSNKFNVYL QQET*RYS*S *ICCKR*YSA S*HLRLRHAI1320 1321 QYRTSLCIND IPVTCIRQ*L LYYTIRHIFG IFVCRHQRRI IHKTSTTFRN E**VDTFEEI1380 1381 TLWIETKWSE LVRNYQIIPD KTVWYGRSSW MVMRI*E*SS NNLLIR**YD IVQQRLKCKE1440 1441 NHNNTQETIR YKDNKSG*K* *RNSVRHTWL RNQISKR*IH EIRYGKLIN* ENTQIKRTFE1500 1501 SKRKKT*RSR STRSLYRPG* TRNR*R*IQR EGT*NAKVDW SSFICWI*I* I*LTILHQHT1560 1561 CSTYTIPL*A SFRHDI*VNT IHVGH*R*TT DMAQKQTYRA R**TSRNK*C FIW*PTILQV1620 1621 TNWQHIFT*W KGNWRKVHQG FINMYFNYGS RNTRDK*ICP IIK*PQSPCA RT*QETNYRI1680 1681 TNRQ*IYNQY NYIQ**REI* KQIFWY*SNE TKR*SIRKSS ARMLYRNQKE YCRRNDQTSS1740 1741 DKNIQTINKQ MDSL |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | No Comments | Hazbun TR, et al. (2003) | |
View Run | No Comments | Hazbun TR, et al. (2003) | |
View Run | No Comments | Hazbun TR, et al. (2003) | |
View Run | No Comments | Hazbun TR, et al. (2003) | |
View Run | No Comments | Reinke A, et al. (2004) | |
View Run | No Comments | Reinke A, et al. (2004) | |
View Run | No Comments | Reinke A, et al. (2004) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.94 |
Source: Reynolds et al. (2008)