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Protein Overview: gi|110740653, gi...

General Information:
Name(s) found: gi|7529767 [NCBI NR]
gi|15229938 [NCBI NR]
gi|11358200 [NCBI NR]
gi|110740653 [NCBI NR]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • gi|7529767|emb|CAB86911.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15229938|ref|NP_190019.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T47423 hypothetical protein T22K7.10 - Arabidopsis thaliana [NCBI NR]
  • gi|110740653|dbj|BAE98429.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 565 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    endoplasmic reticulum [IDA]
    vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: protein processing [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEKKSKQR HRVMVFESMY PILALMLILV ACVELCDAAT VVDVYRLIQY DISGVPFGSR  60
   61 FSSLNHHAAS LSFQRGADLS RSVLILPLRE LDIAFVQDYI SQKQSLGGLL ILLPQTFRPG 120
  121 NVGGGSLSSE NDGFRSLLGQ LEKLLVHGNI PFPVYFAFEN EETDAMLADV KKNDALGQQA 180
  181 TATTGGYKLV ISVSEPRKIA SPTITNIQGW LPGLRAEGDS SQLPTIAVVA SYDTFGAAPA 240
  241 LSVGSDSNGS GVVALLEVAR LFSVLYSNPK TRGKYNLLFA LTSGGPYNYE GTQKWLKSLD 300
  301 QRMRESIDYA ICLNSVGSWD SELLIHVSKP PDNAYIKQIF EGFSNVAEDL GFQVALKHKK 360
  361 INISNSRVAW EHEQFSRLRV TAATLSELST PPELLENAGS LSDTRQLVNE DAIIKGVKLV 420
  421 AESLAKHIYG HQGKDIKIFA DDSSLAVNPF YVRSWLDLLS QTPRVAPFLS KNEPLIMALK 480
  481 KELEDYTAEV SVQHESLDGS FTFYDSTKAS LNIYQVASVT FDLLLLLVLG SYLIVLFSFL 540
  541 VITTRGLDDL ISLFRRPPSR KVKMG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..495] PSI-BLAST 51.69897 Transferrin receptor ectodomain, C-terminal domain; Transferrin receptor ectodomain, apical domain; Transferrin receptor ectodomain, protease-like domain
    2 View Details [496..565] MSA 1.065984 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.32879486130719 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.494380623763342 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.437703290467567 bayes_pls_golite062009
  • receptor activity
    		•  0.422941307819965 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.331034243637565 bayes_pls_golite062009
  • hydrolase activity
    		•  0.268899853285984 bayes_pls_golite062009
  • DNA binding
    		•  0.253291282804265 bayes_pls_golite062009
  • signal transducer activity
    		•  0.0305928044064539 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.0305928044064539 bayes_pls_golite062009
  • protein binding
    		•  0.00854198798870509 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle