YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110740653, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.83
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEKKSKQR HRVMVFESMY PILALMLILV ACVELCDAAT VVDVYRLIQY DISGVPFGSR  60
   61 FSSLNHHAAS LSFQRGADLS RSVLILPLRE LDIAFVQDYI SQKQSLGGLL ILLPQTFRPG 120
  121 NVGGGSLSSE NDGFRSLLGQ LEKLLVHGNI PFPVYFAFEN EETDAMLADV KKNDALGQQA 180
  181 TATTGGYKLV ISVSEPRKIA SPTITNIQGW LPGLRAEGDS SQLPTIAVVA SYDTFGAAPA 240
  241 LSVGSDSNGS GVVALLEVAR LFSVLYSNPK TRGKYNLLFA LTSGGPYNYE GTQKWLKSLD 300
  301 QRMRESIDYA ICLNSVGSWD SELLIHVSKP PDNAYIKQIF EGFSNVAEDL GFQVALKHKK 360
  361 INISNSRVAW EHEQFSRLRV TAATLSELST PPELLENAGS LSDTRQLVNE DAIIKGVKLV 420
  421 AESLAKHIYG HQGKDIKIFA DDSSLAVNPF YVRSWLDLLS QTPRVAPFLS KNEPLIMALK 480
  481 KELEDYTAEV SVQHESLDGS FTFYDSTKAS LNIYQVASVT FDLLLLLVLG SYLIVLFSFL 540
  541 VITTRGLDDL ISLFRRPPSR KVKMG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle