| Protein: | gi|110740653, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 565 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110740653, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
410.0 | [0..22] | [556..355] |
|
Region A: Residues: [1-495] |
1 11 21 31 41 51
| | | | | |
1 MAEEKKSKQR HRVMVFESMY PILALMLILV ACVELCDAAT VVDVYRLIQY DISGVPFGSR 60
61 FSSLNHHAAS LSFQRGADLS RSVLILPLRE LDIAFVQDYI SQKQSLGGLL ILLPQTFRPG 120
121 NVGGGSLSSE NDGFRSLLGQ LEKLLVHGNI PFPVYFAFEN EETDAMLADV KKNDALGQQA 180
181 TATTGGYKLV ISVSEPRKIA SPTITNIQGW LPGLRAEGDS SQLPTIAVVA SYDTFGAAPA 240
241 LSVGSDSNGS GVVALLEVAR LFSVLYSNPK TRGKYNLLFA LTSGGPYNYE GTQKWLKSLD 300
301 QRMRESIDYA ICLNSVGSWD SELLIHVSKP PDNAYIKQIF EGFSNVAEDL GFQVALKHKK 360
361 INISNSRVAW EHEQFSRLRV TAATLSELST PPELLENAGS LSDTRQLVNE DAIIKGVKLV 420
421 AESLAKHIYG HQGKDIKIFA DDSSLAVNPF YVRSWLDLLS QTPRVAPFLS KNEPLIMALK 480
481 KELEDYTAEV SVQHE
|
| Detection Method: |  |
| Confidence: | 51.69897 |
| Match: | 1de4C |
| Description: | Transferrin receptor ectodomain, C-terminal domain; Transferrin receptor ectodomain, apical domain; Transferrin receptor ectodomain, protease-like domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.32879486130719 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.494380623763342 | bayes_pls_golite062009 |
| transcription regulator activity | 0.437703290467567 | bayes_pls_golite062009 |
| receptor activity | 0.422941307819965 | bayes_pls_golite062009 |
| nucleic acid binding | 0.331034243637565 | bayes_pls_golite062009 |
| hydrolase activity | 0.268899853285984 | bayes_pls_golite062009 |
| DNA binding | 0.253291282804265 | bayes_pls_golite062009 |
| signal transducer activity | 0.0305928044064539 | bayes_pls_golite062009 |
| molecular transducer activity | 0.0305928044064539 | bayes_pls_golite062009 |
| protein binding | 0.00854198798870509 | bayes_pls_golite062009 |
|
Region A: Residues: [496-565] |
1 11 21 31 41 51
| | | | | |
1 SLDGSFTFYD STKASLNIYQ VASVTFDLLL LLVLGSYLIV LFSFLVITTR GLDDLISLFR 60
61 RPPSRKVKMG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
