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Protein Overview: APA1_ARATH

General Information:
Name(s) found: APA1_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Aspartic proteinase A1 OS=Arabidopsis thaliana GN=APA1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 506 amino acids

    Gene Ontology:
    Cellular Component: vacuole [IDA]
    Biological Process: response to salt stress [IEP]
    proteolysis [IDA][ISS]
    Molecular Function: endopeptidase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIYSRTVAV SLIVSFLLCF SAFAERNDGT FRVGLKKLKL DSKNRLAARV ESKQEKPLRA  60
   61 YRLGDSGDAD VVVLKNYLDA QYYGEIAIGT PPQKFTVVFD TGSSNLWVPS SKCYFSLACL 120
  121 LHPKYKSSRS STYEKNGKAA AIHYGTGAIA GFFSNDAVTV GDLVVKDQEF IEATKEPGIT 180
  181 FVVAKFDGIL GLGFQEISVG KAAPVWYNML KQGLIKEPVF SFWLNRNADE EEGGELVFGG 240
  241 VDPNHFKGKH TYVPVTQKGY WQFDMGDVLI GGAPTGFCES GCSAIADSGT SLLAGPTTII 300
  301 TMINHAIGAA GVVSQQCKTV VDQYGQTILD LLLSETQPKK ICSQIGLCTF DGTRGVSMGI 360
  361 ESVVDKENAK LSNGVGDAAC SACEMAVVWI QSQLRQNMTQ ERILNYVNEL CERLPSPMGE 420
  421 SAVDCAQLST MPTVSLTIGG KVFDLAPEEY VLKVGEGPVA QCISGFIALD VAPPRGPLWI 480
  481 LGDVFMGKYH TVFDFGNEQV GFAEAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..506] PSI-BLAST 133.0 (Pro)phytepsin; Plant acid proteinase, phytepsin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.01508543827677 bayes_pls_golite062009
  • hydrolase activity
    		•  0.77554493777157 bayes_pls_golite062009
  • peptidase activity
    		•  0.68518523369811 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.43925265235199 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43264884039584 bayes_pls_golite062009
  • aspartic-type endopeptidase activity
    		•  0.30585066730542 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  0.30585066730542 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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