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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: APA1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIYSRTVAV SLIVSFLLCF SAFAERNDGT FRVGLKKLKL DSKNRLAARV ESKQEKPLRA  60
   61 YRLGDSGDAD VVVLKNYLDA QYYGEIAIGT PPQKFTVVFD TGSSNLWVPS SKCYFSLACL 120
  121 LHPKYKSSRS STYEKNGKAA AIHYGTGAIA GFFSNDAVTV GDLVVKDQEF IEATKEPGIT 180
  181 FVVAKFDGIL GLGFQEISVG KAAPVWYNML KQGLIKEPVF SFWLNRNADE EEGGELVFGG 240
  241 VDPNHFKGKH TYVPVTQKGY WQFDMGDVLI GGAPTGFCES GCSAIADSGT SLLAGPTTII 300
  301 TMINHAIGAA GVVSQQCKTV VDQYGQTILD LLLSETQPKK ICSQIGLCTF DGTRGVSMGI 360
  361 ESVVDKENAK LSNGVGDAAC SACEMAVVWI QSQLRQNMTQ ERILNYVNEL CERLPSPMGE 420
  421 SAVDCAQLST MPTVSLTIGG KVFDLAPEEY VLKVGEGPVA QCISGFIALD VAPPRGPLWI 480
  481 LGDVFMGKYH TVFDFGNEQV GFAEAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle