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Protein Overview: gi|15238695, gi|...

General Information:
Name(s) found: gi|9757889 [NCBI NR]
gi|91806874 [NCBI NR]
gi|15238695 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|9757889|dbj|BAB08396.1| disease resistance protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|91806874|gb|ABE66164.1| disease resistance protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15238695|ref|NP_197298.1| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 780 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA]
    protein binding [IEA]
    transmembrane receptor activity [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVSSSSSF SDRHSYHVFP SFCGEDVRRN FLSHLHKELQ HNGIDAFKDG GIKRSRSIWP  60
   61 ELKQAIWESK IFIVVLSKNY AGSCWCLDEL VEIMECREVV GKTLVPIFYD VDPSSVRKQT 120
  121 GDFGKAFDKI CDVRTEEERQ RWRQALTNVG NIAGECSSKW DNDAKMIEKI VAYVSEELFC 180
  181 FTSSTDFEDL LGLEAHVANL KSMLGLESNE VKMIGVWGPA GIGKTTITRI LYNQLSSSND 240
  241 DDFQLFIFME NVKGSYRRKE IDGYSMKLHL RERFLSEITT QRKIKVSHLG VAQERLKNQK 300
  301 ALIVLDDVDE LEQLRALADQ TQWVGNGTRI LVTTEDRQLL KAHGITHVYE VDYPSRDEAL 360
  361 KILCQCAFGK NSAPEGYNDL AVEVVELAGY LPLGLSVLGA SLRGMSKKEW INALPRLRTS 420
  421 LNGKIEKLLR VCYEGLDEKD KAIFLHIACL FNGKNVDRVK LLLAKSALDV EFGLKVLVDR 480
  481 SLIHIDADGY IVMHCLLQQL GKEITRGQCL DEPGKRKFLV DSLEISDVLA DETGTETVLG 540
  541 ISLDMSEIED QVYVSEKAFE KMPNLQFLWL YKNFPDEAVK LYLPHGLDYL PRKLRLLHWD 600
  601 SYPKKCLPSK FRPEFLVELT MRDSKLEKLW EGIQPLKSLK RMDLSASTKI KDIPNLSRAT 660
  661 NLEKLYLRFC KNLVIVPSSC LQNLHKLKVL DMSCCIKLKS LPDNINLKSL SVLNMRGCSK 720
  721 LNNFPLISTQ IQFMSLGETA IEKVPSVIKL CSRLVSLEMA GCKNLKTLPY LPASIEIVDI 780
  781

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..207] FFAS03 4.26 Toll-like receptor 1, TLR1
    2 View Details [208..615] PSI-BLAST 3.39794 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [616..780] PSI-BLAST 10.39794 No description for 2z82A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.166909062418251 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle