YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: LRK63_ARATH

General Information:
Name(s) found: LRK63_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • Lectin-domain containing receptor kinase VI.3 OS=Arabidopsis thaliana GN=LECRK63 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 688 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IEP]
    Biological Process: abscisic acid mediated signaling pathway [IMP]
    seed germination [IMP]
    Molecular Function: ATP binding [IEA]
    sugar binding [IEA]
    protein kinase activity [IEA]
    protein serine/threonine kinase activity [IEA]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVLFLLLTI PTRAQRTTTE TPKTEFIFRG FSGNQSNIVT TGAATIKLDG LLRLTDRNSN  60
   61 VTGTSFYHKP VRLLETNTSS TNSTIRSFST SFVFVIIPTS SSNGGFGFTF TLSPTPDRTG 120
  121 AESAQYLGLL NKANDGNSTN HVFAVEFDTV QGFKDGADRT GNHIGLNFNS LTSDVQEPVV 180
  181 YYDNEDPNRK EDFPLQSGDP IRAILDYDGP TQTLNLTVYP ANLKSRPVRP LISRPVPKLS 240
  241 QIVQEEMYVG FTAATGRDQS SAHYVMGWSF SSGGDLLTED TLDLLELPRP PPNTAKKRGY 300
  301 NSQVLALIVA LSGVTVILLA LLFFFVMYKK RLQQGEVLED WEINHPHRLR YKDLYAATDG 360
  361 FKENRIVGTG GFGTVFRGNL SSPSSDQIAV KKITPNSMQG VREFIAEIES LGRLRHKNLV 420
  421 NLQGWCKQKN DLLLIYDYIP NGSLDSLLYS RPRQSGVVLS WNARFKIAKG IASGLLYLHE 480
  481 EWEKVVIHRD IKPSNVLIED DMNPRLGDFG LARLYERGSQ SNTTVVVGTI GYMAPELARN 540
  541 GKSSSASDVF AFGVLLLEIV SGRRPTDSGT FFLADWVMEL HARGEILHAV DPRLGFGYDG 600
  601 VEARLALVVG LLCCHQRPTS RPSMRTVLRY LNGDDDVPEI DNDWGYSDSS RSDLGSNFEG 660
  661 YVSSDRASSS VPSFSVTRVS SSSVISGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..331] PSI-BLAST 34.0 Legume lectin
    2 View Details [332..688] PSI-BLAST 68.39794 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.40096962515027 bayes_pls_golite062009
  • protein kinase activity
    		•  1.4419983524192 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.24960126056886 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.24423621131253 bayes_pls_golite062009
  • signal transducer activity
    		•  1.24423621131253 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.22297882223243 bayes_pls_golite062009
  • kinase activity
    		•  1.20198110006055 bayes_pls_golite062009
  • receptor activity
    		•  1.19855418474193 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  1.12075545665641 bayes_pls_golite062009
  • transporter activity
    		•  0.883938295782649 bayes_pls_golite062009
  • protein binding
    		•  0.757492117682468 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.698240496790323 bayes_pls_golite062009
  • transferase activity
    		•  0.634621009477606 bayes_pls_golite062009
  • growth factor binding
    		•  0.504567186763321 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine kinase activity
    		•  0.50233763591332 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.481025719380392 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  0.418250353742262 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.372701974560119 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.339759264844777 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.248374734969893 bayes_pls_golite062009
  • DNA binding
    		•  0.157628282318248 bayes_pls_golite062009
  • receptor binding
    		•  0.10835499255618 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle