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Protein Overview: gi|15242335, gi|...

General Information:
Name(s) found: gi|9759606 [NCBI NR]
gi|15242335 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|9759606|dbj|BAB11394.1| disease resistance protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|15242335|ref|NP_199334.1| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 697 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: ATP binding [IEA]
    transmembrane receptor activity [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSKADEVF IDFSGIETRN SFVSHLSAAF RRRSVSVCLG GDCTDVVTPR KTNEGCKVFV  60
   61 VVFSEDYALS KQCLDTLVEF LERKDDGLVI VPVYYGGVTE SMVKQQTERF GVAFTQHQNN 120
  121 YSYDQVAKWR DCLIQTASLP GHELNLQQED SEFVEKIVAD VREVLDATGK IGIYSRLLEI 180
  181 EKLLCKQSLK FYYLGLWGMP GIGKTTIAEA AFKQMSKDFD ASFFVEDFHK EYHKGRPYKL 240
  241 REEHLKKVPK GGSIRGPILS FKELREKKVL FVLDDVRNLM DFESFLGGIE GVSPGSVIIL 300
  301 TSRDKQVLHQ CQVEDVFEVP SLNEEEAVRL FARTAFHKEG PSDAKLMDVS KKVARYAGGN 360
  361 PKALCFYGRE LEKKKKPEEM EEEFEKMRQC PPQEILSLFR SSYDALNDNE RSIFLDIACF 420
  421 FNGEPCDDVM RILEGCGFFP HVGIDRLAER SLLTISKEKR VEMQGFIQDA AREFINQTSR 480
  481 RRRHWEPSRI RLLLENDKSK GNEVIEGIFL DTTKLTFDVN PMAFENMYNL RLLKIYSTHS 540
  541 ETAQELRLTK ELRSLPYELR LLHWEKYPLQ SLPQDFDTRH LVELNMPYSQ LQSLCVGTKS 600
  601 LAKLKMINLS HSQKLLEVDE LAKACNLEKI DLQGCTSLKS IPHTDRLKNL QFLNLSGCTS 660
  661 IKRTEAIKKI KGMNQEGCLR ETTFESMVFE YYVKESS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] FFAS03 3.93 Toll-like receptor 1, TLR1
    2 View Details [186..587] PSI-BLAST 8.69897 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [588..697] PSI-BLAST 7.221849 No description for 2id5A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.166909062418251 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle