| Protein: | gi|15242335, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 697 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15242335, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
400.0 | [0..5] | [694..16] |
|
Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MATSKADEVF IDFSGIETRN SFVSHLSAAF RRRSVSVCLG GDCTDVVTPR KTNEGCKVFV 60
61 VVFSEDYALS KQCLDTLVEF LERKDDGLVI VPVYYGGVTE SMVKQQTERF GVAFTQHQNN 120
121 YSYDQVAKWR DCLIQTASLP GHELNLQQED SEFVEKIVAD VREVLDATGK IGIYSRLLEI 180
181 EKLLC
|
| Detection Method: |  |
| Confidence: | 3.93 |
| Match: | 1fyvA |
| Description: | Toll-like receptor 1, TLR1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.166909062418251 | bayes_pls_golite062009 |
|
Region A: Residues: [186-587] |
1 11 21 31 41 51
| | | | | |
1 KQSLKFYYLG LWGMPGIGKT TIAEAAFKQM SKDFDASFFV EDFHKEYHKG RPYKLREEHL 60
61 KKVPKGGSIR GPILSFKELR EKKVLFVLDD VRNLMDFESF LGGIEGVSPG SVIILTSRDK 120
121 QVLHQCQVED VFEVPSLNEE EAVRLFARTA FHKEGPSDAK LMDVSKKVAR YAGGNPKALC 180
181 FYGRELEKKK KPEEMEEEFE KMRQCPPQEI LSLFRSSYDA LNDNERSIFL DIACFFNGEP 240
241 CDDVMRILEG CGFFPHVGID RLAERSLLTI SKEKRVEMQG FIQDAAREFI NQTSRRRRHW 300
301 EPSRIRLLLE NDKSKGNEVI EGIFLDTTKL TFDVNPMAFE NMYNLRLLKI YSTHSETAQE 360
361 LRLTKELRSL PYELRLLHWE KYPLQSLPQD FDTRHLVELN MP
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [588-697] |
1 11 21 31 41 51
| | | | | |
1 YSQLQSLCVG TKSLAKLKMI NLSHSQKLLE VDELAKACNL EKIDLQGCTS LKSIPHTDRL 60
61 KNLQFLNLSG CTSIKRTEAI KKIKGMNQEG CLRETTFESM VFEYYVKESS
|
| Detection Method: | |
| Confidence: | 7.221849 |
| Match: | 2id5A |
| Description: | No description for 2id5A was found. |
