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Protein Overview: COP10_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..182] PSI-BLAST 55.221849 Human Ubiquitin-Conjugating Enzyme (E2) UbcH5b mutant Ser94Gly

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 11.3486134076304 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 11.2964721480824 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 10.2401422444624 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 8.93602533934698 bayes_pls_golite062009
  • ligase activity
  • 5.17219147802758 bayes_pls_golite062009
  • SUMO ligase activity
  • 3.88357560284404 bayes_pls_golite062009
  • ISG15 ligase activity
  • 3.37361650623694 bayes_pls_golite062009
  • NEDD8 ligase activity
  • 3.30521803258995 bayes_pls_golite062009
  • HLH domain binding
  • 2.41376652679018 bayes_pls_golite062009
  • transcription regulator activity
  • 2.21355731489173 bayes_pls_golite062009
  • nucleic acid binding
  • 2.13970605403492 bayes_pls_golite062009
  • DNA binding
  • 1.95596447916631 bayes_pls_golite062009
  • protein binding
  • 1.77678273247394 bayes_pls_golite062009
  • binding
  • 1.75350658654805 bayes_pls_golite062009
  • transcription repressor activity
  • 1.5236035191291 bayes_pls_golite062009
  • transcription activator activity
  • 1.19240180311941 bayes_pls_golite062009
  • catalytic activity
  • 0.891402822028799 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.58835335751383 bayes_pls_golite062009
  • kinase activity
  • 0.519703305315987 bayes_pls_golite062009
  • protein kinase activity
  • 0.443948654247666 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.373779304908933 bayes_pls_golite062009
  • small protein activating enzyme activity
  • 0.36227294335656 bayes_pls_golite062009
  • protein serine/threonine kinase activity
  • 0.182854082413338 bayes_pls_golite062009
  • transcription corepressor activity
  • 0.122859425935324 bayes_pls_golite062009
  • transferase activity
  • 0.0984525836903841 bayes_pls_golite062009
  • transcription factor binding
  • 0.0104967529560147 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.62

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle