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Protein Overview: UEV1D_ARATH

General Information:
Name(s) found: UEV1D_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75313930|sp|Q9SVD7.1|UEV1D_ARATH RecName: Full=Ubiquitin-conjugating enzyme E2 variant 1D; Short=Ubc enzyme variant 1D; AltName: Full=Protein MMS ZWEI HOMOLOG 4 [NCBI NR]
  • pir||T08443 probable DNA-binding protein F22O6.60 - Arabidopsis thaliana [NCBI NR]
  • gi|4886271|emb|CAB43411.1| putative DNA-binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21553737|gb|AAM62830.1| E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|18409633|ref|NP_566968.1| UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4); protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] [NCBI NR]
  • gi|18377482|gb|AAL66907.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14596117|gb|AAK68786.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1 SV=1 [Swiss-Prot]
  • (Q9SVD7) Putative DNA-binding protein (EC 6.3.2.19) (Unknown protein) (Hypothetical protein) (Ubiquitin-conjugating enzyme E2) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (E2, ubiquitin-conjugating enzyme, putative) [athaliana3702.FASTAC.txt]
  • E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana]gi|4886271|emb|CAB43411.1| putative DNA-binding protein [Arabidopsis thaliana]gi|18377482|gb|AAL66907.1| unknown protein [Arabidopsis thaliana]gi|14596117|gb|AAK68786.1| Unknown protein [ [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ubiquitin-conjugating enzyme family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: MMZ4, UEV1D, UEV1D-4 | MMZ4/UEV1D/UEV1D-4 (MMS ZWEI HOMOLOGE 4, UBIQUITIN E2 VARIANT 1D-4); protein binding / ubiquitin-protein ligase | chr3:19505656-19506932 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative DNA-binding protein [Arabidopsis thaliana] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: UEV1D-4, MMZ4, UEV1D | ubiquitin E2 variant 1D-4 | chr3:19494678-19495954 REVERSE LENGTH=146 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 146 amino acids

    Gene Ontology:
    Cellular Component: UBC13-MMS2 complex [IPI]
    Biological Process: response to DNA damage stimulus [IMP]
    postreplication repair [IGI]
    Molecular Function: ubiquitin-protein ligase activity [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLGSGGSSV VVPRNFRLLE ELERGEKGIG DGTVSYGMDD GDDIYMRSWT GTIIGPHNTV  60
   61 HEGRIYQLKL FCDKDYPEKP PTVRFHSRVN MACVNHETGV VDPKKFGLLA NWQREYTMED 120
  121 ILVQLKKEMS TSHNRKLVQP PEGTCF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] PSI-BLAST 36.09691 Structure of the human ubiquitin-conjugating enzyme E2 variant 1 (UEV-1)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ubiquitin-protein ligase activity
    		•  7.07009148420636 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  7.03976510657099 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  6.00007452476109 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  5.06177413452771 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.9559492182519 bayes_pls_golite062009
  • ligase activity
    		•  1.88059319399119 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.83472092683523 bayes_pls_golite062009
  • DNA binding
    		•  1.77393825735008 bayes_pls_golite062009
  • binding
    		•  1.75350658654805 bayes_pls_golite062009
  • catalytic activity
    		•  0.891402822028799 bayes_pls_golite062009
  • SUMO ligase activity
    		•  0.843488104298821 bayes_pls_golite062009
  • protein binding
    		•  0.726328463755484 bayes_pls_golite062009
  • NEDD8 ligase activity
    		•  0.715654744941217 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.58835335751383 bayes_pls_golite062009
  • kinase activity
    		•  0.519703305315987 bayes_pls_golite062009
  • protein kinase activity
    		•  0.443948654247666 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.373779304908933 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  0.182854082413338 bayes_pls_golite062009
  • transferase activity
    		•  0.0984525836903841 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle