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Protein Overview: gi|2351097, gi|1...

General Information:
Name(s) found: gi|7523408 [NCBI NR]
gi|2351097 [NCBI NR]
gi|21436423 [NCBI NR]
gi|19310609 [NCBI NR]
gi|15229398 [NCBI NR]
gi|11259778 [NCBI NR]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • gi|7523408|emb|CAB86427.1| ATMRK1 [Arabidopsis thaliana] [NCBI NR]
  • gi|2351097|dbj|BAA22079.1| ATMRK1 [Arabidopsis thaliana] [NCBI NR]
  • gi|21436423|gb|AAM51412.1| putative ATMRK1 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|19310609|gb|AAL85035.1| putative ATMRK1 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15229398|ref|NP_191885.1| ATMRK1; kinase/ protein serine/threonine/tyrosine kinase [Arabidopsis thaliana] [NCBI NR]
  • pir||T48115 protein kinase ATMRK1 (EC 2.7.1.-) [imported] - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 391 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: protein amino acid phosphorylation [IEA]
    Molecular Function: protein serine/threonine/tyrosine kinase activity [ISS]
    kinase activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGGGEADK SLEIGSGTAD PKIGGTGSRS AGEERYFRAD TLDFSKWDLH MGQTSTSSVL  60
   61 TNSASTSAPA PAMQEWEIDL SKLDMKHVLA HGTYGTVYRG VYAGQEVAVK VLDWGEDGYA 120
  121 TPAETTALRA SFEQEVAVWQ KLDHPNVTKF IGASMGTSDL RIPPAGDTGG RGNGAHPARA 180
  181 CCVVVEYVAG GTLKKFLIKK YRAKLPIKDV IQLALDLARG LSYLHSKAIV HRDVKSENML 240
  241 LQPNKTLKIA DFGVARVEAQ NPQDMTGETG TLGYMAPEVL EGKPYNRKCD VYSFGVCLWE 300
  301 IYCCDMPYAD CSFAEISHAV VHRNLRPEIP KCCPHAVANI MKRCWDPNPD RRPEMEEVVK 360
  361 LLEAIDTSKG GGMIAPDQFQ GCLCFFKPRG P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..391] PSI-BLAST 81.09691 CHICKEN SRC TYROSINE KINASE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphotransferase activity, alcohol group as acceptor
    		•  5.49988294224815 bayes_pls_golite062009
  • protein kinase activity
    		•  5.4586557943719 bayes_pls_golite062009
  • kinase activity
    		•  5.3287080791198 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  4.96052051118534 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  4.46381887831481 bayes_pls_golite062009
  • transferase activity
    		•  3.97138602499442 bayes_pls_golite062009
  • binding
    		•  2.74863538127007 bayes_pls_golite062009
  • ATP binding
    		•  1.97600611746091 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  1.93596671856664 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  1.90928021591891 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  1.65732943334212 bayes_pls_golite062009
  • ribonucleotide binding
    		•  1.65726906484847 bayes_pls_golite062009
  • purine nucleotide binding
    		•  1.63763394711025 bayes_pls_golite062009
  • nucleotide binding
    		•  1.63195828048121 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  1.3898059094397 bayes_pls_golite062009
  • receptor signaling protein serine/threonine kinase activity
    		•  1.38496328649031 bayes_pls_golite062009
  • molecular adaptor activity
    		•  1.33740973673697 bayes_pls_golite062009
  • receptor signaling protein activity
    		•  1.27291233344322 bayes_pls_golite062009
  • SH3/SH2 adaptor activity
    		•  1.2323381312171 bayes_pls_golite062009
  • protein binding
    		•  1.22565748038754 bayes_pls_golite062009
  • catalytic activity
    		•  1.21655087018101 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.16822929050287 bayes_pls_golite062009
  • protein binding, bridging
    		•  0.83823250804321 bayes_pls_golite062009
  • MAP kinase activity
    		•  0.81943579965027 bayes_pls_golite062009
  • tubulin binding
    		•  0.651175424483155 bayes_pls_golite062009
  • cyclin-dependent protein kinase activity
    		•  0.499492353295369 bayes_pls_golite062009
  • protein serine/threonine/tyrosine kinase activity
    		•  0.48345772948903 bayes_pls_golite062009
  • protein phosphorylated amino acid binding
    		•  0.43808715710519 bayes_pls_golite062009
  • magnesium ion binding
    		•  0.393328812780268 bayes_pls_golite062009
  • MAP kinase kinase kinase activity
    		•  0.37115026509016 bayes_pls_golite062009
  • MAP kinase kinase activity
    		•  0.35402045013148 bayes_pls_golite062009
  • signal transducer activity
    		•  0.270054246024761 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.270054246024761 bayes_pls_golite062009
  • microtubule binding
    		•  0.154539027400552 bayes_pls_golite062009
  • actin binding
    		•  0.123104851483289 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  0.0556163711947139 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.00652065412910241 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle