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View Structure Prediction Details

Protein: gi|2351097, gi|1...
Organism: Arabidopsis thaliana
Length: 391 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2351097, gi|1....

Description E-value Query
Range
Subject
Range
gi|21554375 - gi|21554375|gb|AAM63482.1| ATMRK1 [Arabidopsis thaliana]
335.0 [0..1] [391..1]

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Predicted Domain #1
Region A:
Residues: [1-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGGGEADK SLEIGSGTAD PKIGGTGSRS AGEERYFRAD TLDFSKWDLH MGQTSTSSVL  60
   61 TNSASTSAPA PAMQEWEIDL SKLDMKHVLA HGTYGTVYRG VYAGQEVAVK VLDWGEDGYA 120
  121 TPAETTALRA SFEQEVAVWQ KLDHPNVTKF IGASMGTSDL RIPPAGDTGG RGNGAHPARA 180
  181 CCVVVEYVAG GTLKKFLIKK YRAKLPIKDV IQLALDLARG LSYLHSKAIV HRDVKSENML 240
  241 LQPNKTLKIA DFGVARVEAQ NPQDMTGETG TLGYMAPEVL EGKPYNRKCD VYSFGVCLWE 300
  301 IYCCDMPYAD CSFAEISHAV VHRNLRPEIP KCCPHAVANI MKRCWDPNPD RRPEMEEVVK 360
  361 LLEAIDTSKG GGMIAPDQFQ GCLCFFKPRG P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.09691
Match: 2ptkA
Description: CHICKEN SRC TYROSINE KINASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphotransferase activity, alcohol group as acceptor 5.49988294224815 bayes_pls_golite062009
protein kinase activity 5.4586557943719 bayes_pls_golite062009
kinase activity 5.3287080791198 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.96052051118534 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
transferase activity 3.97138602499442 bayes_pls_golite062009
binding 2.74863538127007 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
protein tyrosine kinase activity 1.3898059094397 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.38496328649031 bayes_pls_golite062009
molecular adaptor activity 1.33740973673697 bayes_pls_golite062009
receptor signaling protein activity 1.27291233344322 bayes_pls_golite062009
SH3/SH2 adaptor activity 1.2323381312171 bayes_pls_golite062009
protein binding 1.22565748038754 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
cytoskeletal protein binding 1.16822929050287 bayes_pls_golite062009
protein binding, bridging 0.83823250804321 bayes_pls_golite062009
MAP kinase activity 0.81943579965027 bayes_pls_golite062009
tubulin binding 0.651175424483155 bayes_pls_golite062009
cyclin-dependent protein kinase activity 0.499492353295369 bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity 0.48345772948903 bayes_pls_golite062009
protein phosphorylated amino acid binding 0.43808715710519 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
MAP kinase kinase kinase activity 0.37115026509016 bayes_pls_golite062009
MAP kinase kinase activity 0.35402045013148 bayes_pls_golite062009
signal transducer activity 0.270054246024761 bayes_pls_golite062009
molecular transducer activity 0.270054246024761 bayes_pls_golite062009
microtubule binding 0.154539027400552 bayes_pls_golite062009
actin binding 0.123104851483289 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.0556163711947139 bayes_pls_golite062009
transmembrane receptor activity 0.00652065412910241 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle