YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Y1848_ARATH

General Information:
Name(s) found: Y1848_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 655 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway [ISS]
    protein amino acid phosphorylation [IEA][ISS]
    Molecular Function: ATP binding [ISS]
    protein serine/threonine kinase activity [ISS]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS  60
   61 PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR TLSLRLNALS GSLPKDLSTS 120
  121 SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ 180
  181 LSGSIPDLDL PLVQFNVSNN SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ 240
  241 PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR 300
  301 AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA 360
  361 TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR LKDVMMADKE FKEKIELVGA 420
  421 MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR 480
  481 GLDYLHSQGT STSHGNIKSS NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT 540
  541 DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL 600
  601 LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..256] PSI-BLAST 14.154902 Polygalacturonase inhibiting protein PGIP
    2 View Details [257..342] deduced N/A No confident structure predictions are available.
    3 View Details [343..655] PSI-BLAST 61.522879 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • receptor activity
    		•  3.26307298864411 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  3.15814977487775 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • signal transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  2.38174370875276 bayes_pls_golite062009
  • protein kinase activity
    		•  1.61450095469422 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  1.50579173120225 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine kinase activity
    		•  1.36671598599873 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.36168522830563 bayes_pls_golite062009
  • kinase activity
    		•  1.28067810202729 bayes_pls_golite062009
  • binding
    		•  1.23313855731605 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.875083054478353 bayes_pls_golite062009
  • protein binding
    		•  0.646159692466759 bayes_pls_golite062009
  • receptor binding
    		•  0.596307412859703 bayes_pls_golite062009
  • transferase activity
    		•  0.435331931559158 bayes_pls_golite062009
  • epidermal growth factor receptor binding
    		•  0.430075899423884 bayes_pls_golite062009
  • protein-hormone receptor activity
    		•  0.42902267001067 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.231213253402712 bayes_pls_golite062009
  • growth factor binding
    		•  0.0358215683345522 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle