| Protein: | Y1848_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 655 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1848_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
360.0 | [0..3] | [653..134] |
|
Region A: Residues: [1-256] |
1 11 21 31 41 51
| | | | | |
1 MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS 60
61 PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR TLSLRLNALS GSLPKDLSTS 120
121 SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ 180
181 LSGSIPDLDL PLVQFNVSNN SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ 240
241 PTSGGNRTPP SVEGSE
|
| Detection Method: |  |
| Confidence: | 14.154902 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 3.26307298864411 | bayes_pls_golite062009 |
| transmembrane receptor activity | 3.15814977487775 | bayes_pls_golite062009 |
| molecular transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| signal transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 2.38174370875276 | bayes_pls_golite062009 |
| protein kinase activity | 1.61450095469422 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 1.50579173120225 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 1.36671598599873 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.36168522830563 | bayes_pls_golite062009 |
| kinase activity | 1.28067810202729 | bayes_pls_golite062009 |
| binding | 1.23313855731605 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.875083054478353 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| receptor binding | 0.596307412859703 | bayes_pls_golite062009 |
| transferase activity | 0.435331931559158 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.430075899423884 | bayes_pls_golite062009 |
| protein-hormone receptor activity | 0.42902267001067 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.231213253402712 | bayes_pls_golite062009 |
| growth factor binding | 0.0358215683345522 | bayes_pls_golite062009 |
|
Region A: Residues: [257-342] |
1 11 21 31 41 51
| | | | | |
1 EKKKKNKLSG GAIAGIVIGC VVGFALIVLI LMVLCRKKSN KRSRAVDIST IKQQEPEIPG 60
61 DKEAVDNGNV YSVSAAAAAA MTGNGK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [343-655] |
1 11 21 31 41 51
| | | | | |
1 ASEGNGPATK KLVFFGNATK VFDLEDLLRA SAEVLGKGTF GTAYKAVLDA VTVVAVKRLK 60
61 DVMMADKEFK EKIELVGAMD HENLVPLRAY YFSRDEKLLV YDFMPMGSLS ALLHGNRGAG 120
121 RSPLNWDVRS RIAIGAARGL DYLHSQGTST SHGNIKSSNI LLTKSHDAKV SDFGLAQLVG 180
181 SSATNPNRAT GYRAPEVTDP KRVSQKGDVY SFGVVLLELI TGKAPSNSVM NEEGVDLPRW 240
241 VKSVARDEWR REVFDSELLS LATDEEEMMA EMVQLGLECT SQHPDQRPEM SEVVRKMENL 300
301 RPYSGSDQVN EAD
|
| Detection Method: | |
| Confidence: | 61.522879 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
