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Protein Overview: gi|15234388, gi|...

General Information:
Name(s) found: gi|7484909 [NCBI NR]
gi|7267902 [NCBI NR]
gi|4586106 [NCBI NR]
gi|15234388 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||T06608 disease resistance protein homolog F16J13.80 - Arabidopsis thaliana [NCBI NR]
  • gi|7267902|emb|CAB78244.1| putative disease resistance protein (TMV N-like) [Arabidopsis thaliana] [NCBI NR]
  • gi|4586106|emb|CAB40942.1| putative disease resistance protein (TMV N-like) [Arabidopsis thaliana] [NCBI NR]
  • gi|15234388|ref|NP_192938.1| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1219 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: ATP binding [IEA]
    transmembrane receptor activity [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSSPSSAE FDVFLSFRGF DTRNNFTGHL QKALRLRGID SFIDDRLRRG DNLTALFDRI  60
   61 EKSKIAIIVF STNYANSAWC LRELVKILEC RNSNQQLVVP IFYKVDKSDV EKQRNSFAVP 120
  121 FKLPELTFPG VTPEEISSWK AALASASNIL GYVVKEISTS EAKLVDEIAV DTFKKLNDLA 180
  181 PSGNEGLVGI ESRLKNLEKL LSWEDLDTVH IIGIVGMVGI GKTTLADCLY GRMRGQFDGS 240
  241 CFLTNIRENS GRSGLESLLQ KLFSTVLNDR DLEIGAPGNA HERFERRLKS KRLLIVLDDV 300
  301 NDEKQIRYLM GHCKWYQGGS RIIITTRDSK LIETIKGRKY VLPKLNDREA LKLFSLNAFS 360
  361 NSFPLKEFEG LTNMVLDYAK GHPLALKVLG SDLCERDDLY WEAKLDRLKS RSHGDIYEVL 420
  421 ETSYEELTTE QKNVFLDIAC FFRSENVDYV TSLLNSHGVD VSGVVKDLVD KCLITLSDNR 480
  481 IEMHDMLQTM AKEISLKVET IGIRDCRWLS RHGNQCQWHI RLWDSEDICD LLTEGLGTDK 540
  541 IRGIFLDTSK LRAMRLSAKA FQGMYNLKYL KIYDSHCSRG CEAEFKLHLR RGLSFLPNEL 600
  601 TYLHWHGYPL QSIPLDFDPK NLVDLKLPHS QLEEIWDDEK DVGMLKWVDL SHSINLRQCL 660
  661 GLANAHNLER LNLEGCTSLK KLPSTINCLE KLIYLNLRDC TSLRSLPKGI KTQSLQTLIL 720
  721 SGCSSLKKFP LISENVEVLL LDGTVIKSLP ESIQTFRRLA LLNLKNCKKL KHLSSDLYKL 780
  781 KCLQELILSG CSQLEVFPEI KEDMESLEIL LMDDTSITEM PKMMHLSNIK TFSLCGTSSH 840
  841 VSVSMFFMPP TLGCSRLTDL YLSRCSLYKL PDNIGGLSSL QSLCLSGNNI ENLPESFNQL 900
  901 NNLKWFDLKF CKMLKSLPVL PQNLQYLDAH ECESLETLAN PLTPLTVGER IHSMFIFSNC 960
  961 YKLNQDAQAS LVGHARIKSQ LMANASAKRY YRGFVPEPLV GICYPATEIP SWFCHQRLGR1020
 1021 SLEIPLPPHW CDINFVGLAL SVVVSFKDYE DSAKRFSVKC CGNFENKDSS FTRFDFTLAG1080
 1081 WNEPCGSLSH ESRKLTSDHV FMGYNSCFLV KNVHGESNSC CYTKASFEFY VTDDETRKKI1140
 1141 ETCEVIKCGM SLMYVPEDDD CMLLKKTNIV QLSLKSGPSC SYDLDDVMDD VRPKRGLCQF1200
 1201 VGGEEPGCKR RKEEKITVR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..178] PSI-BLAST 4.522879 Crystal Structure Analysis of ClpB
    2 View Details [179..609] PSI-BLAST 9.69897 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [610..1133] PSI-BLAST 21.69897 The molecular structure of toll-like receptor 3 ligand binding domain
    4 View Details [1134..1219] PSI-BLAST 14.30103 Leucine rich effector protein YopM


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle