| Protein: | gi|15234388, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 1219 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15234388, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
576.0 | [0..2] | [1219..3] |
|
Region A: Residues: [1-178] |
1 11 21 31 41 51
| | | | | |
1 MESSSPSSAE FDVFLSFRGF DTRNNFTGHL QKALRLRGID SFIDDRLRRG DNLTALFDRI 60
61 EKSKIAIIVF STNYANSAWC LRELVKILEC RNSNQQLVVP IFYKVDKSDV EKQRNSFAVP 120
121 FKLPELTFPG VTPEEISSWK AALASASNIL GYVVKEISTS EAKLVDEIAV DTFKKLND
|
| Detection Method: |  |
| Confidence: | 4.522879 |
| Match: | 1qvrA |
| Description: | Crystal Structure Analysis of ClpB |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [179-609] |
1 11 21 31 41 51
| | | | | |
1 LAPSGNEGLV GIESRLKNLE KLLSWEDLDT VHIIGIVGMV GIGKTTLADC LYGRMRGQFD 60
61 GSCFLTNIRE NSGRSGLESL LQKLFSTVLN DRDLEIGAPG NAHERFERRL KSKRLLIVLD 120
121 DVNDEKQIRY LMGHCKWYQG GSRIIITTRD SKLIETIKGR KYVLPKLNDR EALKLFSLNA 180
181 FSNSFPLKEF EGLTNMVLDY AKGHPLALKV LGSDLCERDD LYWEAKLDRL KSRSHGDIYE 240
241 VLETSYEELT TEQKNVFLDI ACFFRSENVD YVTSLLNSHG VDVSGVVKDL VDKCLITLSD 300
301 NRIEMHDMLQ TMAKEISLKV ETIGIRDCRW LSRHGNQCQW HIRLWDSEDI CDLLTEGLGT 360
361 DKIRGIFLDT SKLRAMRLSA KAFQGMYNLK YLKIYDSHCS RGCEAEFKLH LRRGLSFLPN 420
421 ELTYLHWHGY P
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [610-1133] |
1 11 21 31 41 51
| | | | | |
1 LQSIPLDFDP KNLVDLKLPH SQLEEIWDDE KDVGMLKWVD LSHSINLRQC LGLANAHNLE 60
61 RLNLEGCTSL KKLPSTINCL EKLIYLNLRD CTSLRSLPKG IKTQSLQTLI LSGCSSLKKF 120
121 PLISENVEVL LLDGTVIKSL PESIQTFRRL ALLNLKNCKK LKHLSSDLYK LKCLQELILS 180
181 GCSQLEVFPE IKEDMESLEI LLMDDTSITE MPKMMHLSNI KTFSLCGTSS HVSVSMFFMP 240
241 PTLGCSRLTD LYLSRCSLYK LPDNIGGLSS LQSLCLSGNN IENLPESFNQ LNNLKWFDLK 300
301 FCKMLKSLPV LPQNLQYLDA HECESLETLA NPLTPLTVGE RIHSMFIFSN CYKLNQDAQA 360
361 SLVGHARIKS QLMANASAKR YYRGFVPEPL VGICYPATEI PSWFCHQRLG RSLEIPLPPH 420
421 WCDINFVGLA LSVVVSFKDY EDSAKRFSVK CCGNFENKDS SFTRFDFTLA GWNEPCGSLS 480
481 HESRKLTSDH VFMGYNSCFL VKNVHGESNS CCYTKASFEF YVTD
|
| Detection Method: | |
| Confidence: | 21.69897 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1134-1219] |
1 11 21 31 41 51
| | | | | |
1 DETRKKIETC EVIKCGMSLM YVPEDDDCML LKKTNIVQLS LKSGPSCSYD LDDVMDDVRP 60
61 KRGLCQFVGG EEPGCKRRKE EKITVR
|
| Detection Method: | |
| Confidence: | 14.30103 |
| Match: | 1g9uA |
| Description: | Leucine rich effector protein YopM |
Matching Structure (courtesy of the PDB): |
|
