General Information: |
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Name(s) found: |
gi|6579197
[NCBI NR]
gi|15223158 [NCBI NR] |
Description(s) found:
Found 8 descriptions. SHOW ALL |
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Organism: | Arabidopsis thaliana |
Length: | 2271 amino acids |
Gene Ontology: |
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Cellular Component: |
apoplast
[IDA]
epsilon DNA polymerase complex [IPI] |
Biological Process: |
embryonic development ending in seed dormancy
[IMP][NAS]
positive regulation of S phase of mitotic cell cycle [IMP] negative regulation of long-day photoperiodism, flowering [IMP] |
Molecular Function: |
nucleic acid binding
[IEA]
nucleotide binding [IEA] DNA binding [IEA] zinc ion binding [IEA] DNA-directed DNA polymerase activity [IEA][ISS] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSGDNRRRDR KDTRWSKKPK VVNTAEDELE SKLGFGLFSE GETRLGWLLT FSSSSWEDRD 60 61 TGKVYSCVDL YFVTQDGFSF KTKYKFRPYF YAATKDKMEL ELEAYLRRRY ERQVADIEIV 120 121 EKEDLDLKNH LSGLQKKYLK ISFDTVQQLM EVKRDLLHIV ERNQAKFDAL EAYESILAGK 180 181 REQRPQDCLD SIVDLREYDV PYHVRFAIDN DVRSGQWYNV SISSTDVILE KRTDLLQRAE 240 241 VRVCAFDIET TKLPLKFPDA EYDQIMMISY MVDGQGFLII NREVTACVGE DVEDLEYTPK 300 301 PEFEGYFKVT NVKNEVELLQ RWFYHMQELK PGIYVTYNGD FFDWPFIERR ASHHGIKMNE 360 361 ELGFRCDQNQ GECRAKFACH LDCFAWVKRD SYLPQGSHGL KAVTKAKLGY DPLEVNPEDM 420 421 VRFAMEKPQT MASYSVSDAV ATYYLYMTYV NPFIFSLATI IPMVPDEVLR KGSGTLCEML 480 481 LMVEVSTYLP QAQAYKANVV CPNKNQADPE KFYQNQLLES ETYIGGHVEC LESGQLIDNL 540 541 GRDLEYAITV EGKMRMDSIS NYDEVKDEIK EKLEKLRDDP IREEGPLIYH LDVAAMYPNI 600 601 ILTNRLQVHL ISPPSIVTDE ICTACDFNRP GKTCLRKLEW VWRGVTFMGK KSDYYHLKKQ 660 661 IESEFVDAGA NIMSSKSFLD LPKVDQQSKL KERLKKYCQK AYKRVLDKPI TEVREAGICM 720 721 RENPFYVDTV RSFRDRRYEY KTLNKVWKGK LSEAKASGNS IKIQEAQDMV VVYDSLQLAH 780 781 KCILNSFYGY VMRKGARWYS MEMAGVVTYT GAKIIQNARL LIERIGKPLE LDTDGIWCCL 840 841 PGSFPENFTF KTIDMKKLTI SYPCVMLNVD VAKNNTNDQY QTLVDPVRKT YKSHSECSIE 900 901 FEVDGPYKAM IIPASKEEGI LIKKRYAVFN HDGTLAELKG FEIKRRGELK LIKVFQAELF 960 961 DKFLHGSTLE ECYSAVAAVA DRWLDLLDVC EISCFFWVIY LIGFLSHFLQ NQGKDIADSE1020 1021 LLDYISESST MSKSLADYGE QKSCAVTTAK RLAEFLGVTM VKDKGLRCQY IVACEPKGTP1080 1081 VSERAVPVAI FTTNPEVMKF HLRKWCKTSS DVGIRLIIDW SYYKQRLSSA IQKVITIPAA1140 1141 MQKVANPVPR VLHPDWLHKK VREKDDKFRQ RKLVDMFSSA NKDVVLDTDL PVTKDNVEDI1200 1201 EDFCKENRPS VKGPKPIARS YEVNKKQSEC EQQESWDTEF HDISFQNIDK SVNYQGWLEL1260 1261 KKRKWKVTLE KKKKRRLGDL RSSNQVDTHE INQKVGQGRG GVGSYFRRPE EALTSSHWQV1320 1321 CTIIQLVPSP QSGQFFAWVV VEGLMLKIPL SIPRVFYINS KVPIDEYFQG KCVNKILPHG1380 1381 RPCYSLTEAC VKIQEDQFKK ESKKRAALLA DPGVEGIYET KVPLEFSAIC QIGCVCKIDN1440 1441 KAKHRNTQDG WEVGELHMKT TTECHYLKRS IPLVYLYNST STGRAIYVLY CHVSKLMSAV1500 1501 VVDPFNGNEL LPSALERQFR DSCLELSLDS LSWDGIRFQV HYVDHPEAAK KIIQRAISEY1560 1561 REENCGPTVA VIECPDFTFM KEGIKALDDF PCVRIPFNDD DNSYQPVSWQ RPAAKIAMFR1620 1621 CAAAFQWLDR RITQSRYAHV PLGNFGLDWL TFTIDIFLSR ALRDQQQVLW VSDNGVPDLG1680 1681 GINNEEAFFA DEVQQTSLVF PGAYRKVSVE LKIHNLAVNA LLKSNLVNEM EGGGFMGFEQ1740 1741 DVNPRGINSN DNTSFDETTG CAQAFRVLKQ LIHSCLTDVR KSKNIYADSI LQRLSWWLCS1800 1801 PSSKLHDPAL HLMLHKVMQK VFALLLTDLR RLGAIIIYAD FSKVIIDTVK FDLSAAKAYC1860 1861 ESLLSTVRNR LVSSLLDIHV YDLKSHGLHS FSCHDFCASP LTYNYAGIRA DDEISLDEVT1920 1921 IEPKWSVARH LPEYIEVWRQ NPHSNQCSFS ENKKHVATHG PFFLDTDAFH LSWQRDFIII1980 1981 IAKFIFDPWK FAIENKKGSS ESLEAQMIEY LREQIGSTFI NMLVKKVDDI MSHMKEINVS2040 2041 DASRVSGQAP KGDYSLEFIQ VISAVLALDQ NVQQDVLLKT LFITDFIHKS NLISGNVVLE2100 2101 TMFTNRAGFF FEWVMRKSLL KYIKVKECAA EAEFLDPGPS FILPNVACSN CDAYRDLDIC2160 2161 RDPALLTEKE WSCADTQCGK IYDREQMESS LLEMVRQRER MYHMQDVVCI RCNQVKAAHL2220 2221 TEQCECSGSF RCKESGSEFS KRMEIFMDIA KRQKFRLLEE YISWIIYGPS Y |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..62] | ![]() |
123.0 | No description for 2gv9A was found. |
2 | View Details | [63..146] | ![]() |
105.0 | Exonuclease domain of family B (archaeal and phage) DNA polymerases; T4-like DNA polymerase |
3 | View Details | [147..1131] | ![]() |
70.0 | CRYSTAL STRUCTURE OF ENTEROBACTERIA PHAGE RB69 GP43 DNA POLYMERASE COMPLEXED WITH 8-OXOGUANOSINE CONTAINING DNA |
4 | View Details | [1132..1242] | ![]() |
N/A | No confident structure predictions are available. |
5 | View Details | [1243..2096] | ![]() |
3.7 | Crystal structure of ESCHERICHIA coli DNA Polymerase II |
6 | View Details | [2097..2271] | ![]() |
2.038955 | View MSA. No confident structure predictions are available. |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 |
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4 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5 |
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6 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.97 |
Source: Reynolds et al. (2008)