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Protein Overview: gi|42568255, gi|...

General Information:
Name(s) found: gi|8843884 [NCBI NR]
gi|42570590 [NCBI NR]
gi|42568255 [NCBI NR]
Description(s) found:
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  • gi|8843884|dbj|BAA97410.1| disease resistance protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|42570590|ref|NP_851117.2| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
  • gi|42568255|ref|NP_198990.3| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9LSX5) Disease resistance protein-like [athaliana3702.FASTAC.txt]
  • disease resistance protein-like [Arabidopsis thaliana]gi|42568255|ref|NP_198990.3| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana]gi|42570590|ref|NP_851117.2| disease resistance protein (TIR-NBS-LRR class), putative [Arab [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Disease resistance protein (TIR-NBS-LRR class) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:16711275-16714755 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • disease resistance protein-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:16694047-16697527 FORWARD LENGTH=1068 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Disease resistance protein-like OS=Arabidopsis thaliana GN=At5g41750 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1068 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA]
    transmembrane receptor activity [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSSSLSCI KRYQVFSSFH GPDVRKGFLS HLHSVFASKG ITTFNDQKID RGQTIGPELI  60
   61 QGIREARVSI VVLSKKYASS SWCLDELVEI LKCKEALGQI VMTVFYEVDP SDVKKQSGVF 120
  121 GEAFEKTCQG KNEEVKIRWR NALAHVATIA GEHSLNWDNE AKMIQKIVTD VSDKLNLTPS 180
  181 RDFEGMVGME AHLKRLNSLL CLESDEVKMI GIWGPAGIGK TTIARTLFNK ISSIFPFKCF 240
  241 MENLKGSIKG GAEHYSKLSL QKQLLSEILK QENMKIHHLG TIKQWLHDQK VLIILDDVDD 300
  301 LEQLEVLAED PSWFGSGSRI IVTTEDKNIL KAHRIQDIYH VDFPSEEEAL EILCLSAFKQ 360
  361 SSIPDGFEEL ANKVAELCGN LPLGLCVVGA SLRRKSKNEW ERLLSRIESS LDKNIDNILR 420
  421 IGYDRLSTED QSLFLHIACF FNNEKVDYLT ALLADRKLDV VNGFNILADR SLVRISTDGH 480
  481 VVMHHYLLQK LGRRIVHEQW PNEPGKRQFL IEAEEIRDVL TKGTGTESVK GISFDTSNIE 540
  541 EVSVGKGAFE GMRNLQFLRI YRDSFNSEGT LQIPEDMEYI PPVRLLHWQN YPRKSLPQRF 600
  601 NPEHLVKIRM PSSKLKKLWG GIQPLPNLKS IDMSFSYSLK EIPNLSKATN LEILSLEFCK 660
  661 SLVELPFSIL NLHKLEILNV ENCSMLKVIP TNINLASLER LDMTGCSELR TFPDISSNIK 720
  721 KLNLGDTMIE DVPPSVGCWS RLDHLYIGSR SLKRLHVPPC ITSLVLWKSN IESIPESIIG 780
  781 LTRLDWLNVN SCRKLKSILG LPSSLQDLDA NDCVSLKRVC FSFHNPIRAL SFNNCLNLDE 840
  841 EARKGIIQQS VYRYICLPGK KIPEEFTHKA TGRSITIPLS PGTLSASSRF KASILILPVE 900
  901 SYETDDISCS LRTKGGVEVH CCELPYHFLL RSRSEHLFIF HGDLFPQGNK YHEVDVTMSE 960
  961 ITFEFSHTKI GDKIIECGVQ IMTEGAEGDS SRELDSFETE SSSSQVDNFE TGGNNNHHTD1020
 1021 GNGDGNYQAE GFKFFQDENI KTSKHTGFRS WLRELGLKVK KMNSHGVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..389] FFAS03 4.55 Structure of the apoptotic protease-activating factor 1 bound to ADP
    2 View Details [390..501] PSI-BLAST 9.09691 No description for 2z7xA was found.
    3 View Details [502..977] PSI-BLAST 16.30103 No description for 2z63A was found.
    4 View Details [978..1068] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle