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Protein Overview: VATC_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..375] PSI-BLAST 121.0 Crystal Structure of subunit C (vma5p) of the yeast V-ATPase

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • hydrogen ion transmembrane transporter activity
  • 12.3352255617459 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
  • 10.5863459521035 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
  • 9.47957751673845 bayes_pls_golite062009
  • proton-transporting ATPase activity, rotational mechanism
  • 8.04670314838796 bayes_pls_golite062009
  • hydrogen-exporting ATPase activity, phosphorylative mechanism
  • 7.25165353297621 bayes_pls_golite062009
  • cation-transporting ATPase activity
  • 5.95289483482599 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 5.74889738890923 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 5.64669396672268 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 5.22844923180027 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
  • 4.07961473146848 bayes_pls_golite062009
  • transporter activity
  • 3.46526113720851 bayes_pls_golite062009
  • transmembrane transporter activity
  • 3.37048202892137 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 3.36986693191031 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
  • 3.01531981010483 bayes_pls_golite062009
  • primary active transmembrane transporter activity
  • 2.60440013485447 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
  • 2.60069637398921 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
  • 2.58215499145116 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
  • 2.57906484106374 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
  • 2.57862595121731 bayes_pls_golite062009
  • active transmembrane transporter activity
  • 2.50524643368579 bayes_pls_golite062009
  • hydrolase activity
  • 2.11429056985835 bayes_pls_golite062009
  • ATPase activity, coupled
  • 1.96367406225153 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 1.76379885224229 bayes_pls_golite062009
  • pyrophosphatase activity
  • 1.69566510056354 bayes_pls_golite062009
  • ATPase activity
  • 1.69439936736892 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 1.67811565012269 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 1.67577649087358 bayes_pls_golite062009
  • binding
  • 1.5759873319504 bayes_pls_golite062009
  • catalytic activity
  • 0.902495165806215 bayes_pls_golite062009
  • protein binding
  • 0.458389541110755 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle