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Protein Overview: UBC15_ARATH

General Information:
Name(s) found: UBC15_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|66354440|gb|AAY44855.1| ubiquitinating enzyme [Arabidopsis thaliana] [NCBI NR]
  • gi|51971711|dbj|BAD44520.1| At1g45050 [Arabidopsis thaliana] [NCBI NR]
  • gi|2801442|gb|AAC39324.1| ubiquitin-conjugating enzyme 15 [Arabidopsis thaliana] [NCBI NR]
  • gi|26454674|sp|P42743.2|UBC15_ARATH RecName: Full=Ubiquitin-conjugating enzyme 15; AltName: Full=Ubiquitin-conjugating enzyme E2-18 kDa 15; AltName: Full=Ubiquitin-protein ligase; AltName: Full=Ubiquitin carrier protein; AltName: Full=PM42 [NCBI NR]
  • gi|18401461|ref|NP_564493.1| ATUBC2-1; ubiquitin-protein ligase [Arabidopsis thaliana] [NCBI NR]
  • gi|109946565|gb|ABG48461.1| At1g45050 [Arabidopsis thaliana] [NCBI NR]
  • Ubiquitin-conjugating enzyme E2-18 kDa - Arabidopsis thaliana (Mouse-ear cress) [Swiss-Prot]
  • Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2 [Swiss-Prot]
  • (P42743) Ubiquitin-conjugating enzyme E2-18 kDa (EC 6.3.2.19) (Ubiquitin-conjugating enzyme 15) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (PM42) [athaliana3702.FASTAC.txt]
  • At1g45050 [Arabidopsis thaliana]gi|2801442|gb|AAC39324.1| ubiquitin-conjugating enzyme 15 [Arabidopsis thaliana]gi|18401461|ref|NP_564493.1| ubiquitin-conjugating enzyme 15 (UBC15) [Arabidopsis thaliana]gi|26454674|sp|P42743|UBCY_ARATH Ubiquitin-conjug [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ubiquitin-conjugating enzyme E2-18 kDa [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: UBC15, ATUBC2-1 | ATUBC2-1 (ARABIDOPSIS THALIANA UBIQUITIN-CONJUGATING ENZYME 15); ubiquitin-protein ligase | chr1:17033777-17035407 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g45050 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Ubiquitin-conjugating enzyme E2-18 kDa (Ubiquitin-conjugating enzyme 15) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (PM42) [nr-271106-contam.fasta]
  • ubiquitinating enzyme [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ubiquitin-conjugating enzyme 15 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATUBC2-1; ubiquitin conjugating enzyme [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATUBC2-1, UBC15 | Ubiquitin-conjugating enzyme family protein | chr1:17031337-17032967 FORWARD LENGTH=161 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 161 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: negative regulation of flower development [IGI]
    leaf morphogenesis [IGI]
    ubiquitin-dependent protein catabolic process [IDA][TAS]
    Molecular Function: ubiquitin-protein ligase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSSAPSRK ALSKIACNRL QKELSEWQLN PPTGFRHKVT DNLQKWTIDV TGAPGTLYAN  60
   61 ETYQLQVEFP EHYPMEAPQV VFVSPAPSHP HIYSNGHICL DILYDSWSPA MTVNSVCISI 120
  121 LSMLSSSPAK QRPADNDRYV KNCKNGRSPK ETRWWFHDDK V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] PSI-BLAST 49.09691 The 1.1A crystallographic structure of ubiquitin-conjugating enzyme (ubc-2) from Caenorhabditis elegans: functional and evolutionary significance

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ubiquitin-protein ligase activity
    		•  11.3486134076304 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  11.2964721480824 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  10.2401422444624 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  8.93602533934698 bayes_pls_golite062009
  • HLH domain binding
    		•  8.10904818707269 bayes_pls_golite062009
  • ligase activity
    		•  5.17219147802758 bayes_pls_golite062009
  • SUMO ligase activity
    		•  3.88357560284404 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.21355731489173 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.13970605403492 bayes_pls_golite062009
  • DNA binding
    		•  1.95596447916631 bayes_pls_golite062009
  • protein binding
    		•  1.77678273247394 bayes_pls_golite062009
  • binding
    		•  1.75350658654805 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.5236035191291 bayes_pls_golite062009
  • catalytic activity
    		•  0.891402822028799 bayes_pls_golite062009
  • NEDD8 ligase activity
    		•  0.715654744941217 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.58835335751383 bayes_pls_golite062009
  • kinase activity
    		•  0.519703305315987 bayes_pls_golite062009
  • protein kinase activity
    		•  0.443948654247666 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.373779304908933 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  0.182854082413338 bayes_pls_golite062009
  • transcription corepressor activity
    		•  0.122859425935324 bayes_pls_golite062009
  • transferase activity
    		•  0.0984525836903841 bayes_pls_golite062009
  • transcription activator activity
    		•  0.0138208971172455 bayes_pls_golite062009
  • transcription factor binding
    		•  0.0104967529560147 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle