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Protein Overview: CLCG_ARATH

General Information:
Name(s) found: CLCG_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|41688449|sp|P60300.1|CLCG_ARATH RecName: Full=Putative chloride channel-like protein CLC-g [NCBI NR]
  • gi|15242770|ref|NP_198313.1| chloride channel-like (CLC) protein, putative [Arabidopsis thaliana] [NCBI NR]
  • Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana GN=CBSCLC6 PE=2 SV=1 [Swiss-Prot]
  • (P60300) Putative chloride channel-like protein CLC-G [athaliana3702.FASTAC.txt]
  • Putative chloride channel-like protein CLC-Ggi|15242770|ref|NP_198313.1| chloride channel-like (CLC) protein, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Putative chloride channel-like protein CLC-g [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | chloride channel-like (CLC) protein, putative | chr5:12566510-12569535 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Putative chloride channel-like protein CLC-g [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 763 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    intracellular [ISS]
    Biological Process: chloride transport [IEA][ISS]
    Molecular Function: protein binding [IPI]
    anion channel activity [ISS]
    voltage-gated chloride channel activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNSTTEDSV AVPLLPSLRR ATNSTSQVAI VGANVCPIES LDYEIAENDF FKQDWRGRSK  60
   61 VEIFQYVFMK WLLCFCIGII VSLIGFANNL AVENLAGVKF VVTSNMMIAG RFAMGFVVFS 120
  121 VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA 180
  181 SLLIGKAGPM VHTGACVASI LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS 240
  241 FRAPVGGVLF ALEEMSSWSA LLWRIFFSTA VVAIVLRALI DVCLSGKCGL FGKGGLIMFD 300
  301 VYSENASYHL GDVLPVLLLG VVGGILGSLY NFLLDKVLRA YNYIYEKGVT WKILLACAIS 360
  361 IFTSCLLFGL PFLASCQPCP VDALEECPTI GRSGNFKKYQ CPPGHYNDLA SLIFNTNDDA 420
  421 IKNLFSKNTD FEFHYFSVLV FFVTCFFLSI FSYGIVAPAG LFVPVIVTGA SYGRFVGMLL 480
  481 GSNSNLNHGL FAVLGAASFL GGTMRMTVST CVILLELTNN LLLLPMMMVV LLISKTVADG 540
  541 FNANIYNLIM KLKGFPYLYS HAEPYMRQLL VGDVVTGPLQ VFNGIEKVET IVHVLKTTNH 600
  601 NGFPVVDGPP LAAAPVLHGL ILRAHILTLL KKRVFMPSPV ACDSNTLSQF KAEEFAKKGS 660
  661 GRSDKIEDVE LSEEELNMYL DLHPFSNASP YTVVETMSLA KALILFREVG IRHLLVIPKT 720
  721 SNRPPVVGIL TRHDFMPEHI LGLHPSVSRS KWKRLRIRLP FFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..505] PSI-BLAST 57.0 Clc chloride channel
    2 View Details [506..763] PSI-BLAST 17.522879 No description for 2cu0A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • anion channel activity
    		•  6.77290758049983 bayes_pls_golite062009
  • chloride channel activity
    		•  6.77290758049983 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  6.08111514985329 bayes_pls_golite062009
  • voltage-gated chloride channel activity
    		•  5.99544422864122 bayes_pls_golite062009
  • voltage-gated anion channel activity
    		•  5.99544422864122 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  5.07840957725271 bayes_pls_golite062009
  • ion channel activity
    		•  4.93164650815682 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  4.81149777353187 bayes_pls_golite062009
  • channel activity
    		•  4.78965126968592 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  4.78965126968592 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.67227438984104 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  4.27956097534048 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  4.255638017629 bayes_pls_golite062009
  • gated channel activity
    		•  4.1072949331811 bayes_pls_golite062009
  • transporter activity
    		•  2.94995161862691 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.84443650880263 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.82470397063503 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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