| Protein: | CLCG_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 763 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLCG_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
462.0 | [0..3] | [750..50] |
|
Region A: Residues: [1-505] |
1 11 21 31 41 51
| | | | | |
1 MPNSTTEDSV AVPLLPSLRR ATNSTSQVAI VGANVCPIES LDYEIAENDF FKQDWRGRSK 60
61 VEIFQYVFMK WLLCFCIGII VSLIGFANNL AVENLAGVKF VVTSNMMIAG RFAMGFVVFS 120
121 VTNLILTLFA SVITAFVAPA AAGSGIPEVK AYLNGVDAPE IFSLRTLIIK IIGNISAVSA 180
181 SLLIGKAGPM VHTGACVASI LGQGGSKRYR LTWRWLRFFK NDRDRRDLVT CGAAAGIAAS 240
241 FRAPVGGVLF ALEEMSSWSA LLWRIFFSTA VVAIVLRALI DVCLSGKCGL FGKGGLIMFD 300
301 VYSENASYHL GDVLPVLLLG VVGGILGSLY NFLLDKVLRA YNYIYEKGVT WKILLACAIS 360
361 IFTSCLLFGL PFLASCQPCP VDALEECPTI GRSGNFKKYQ CPPGHYNDLA SLIFNTNDDA 420
421 IKNLFSKNTD FEFHYFSVLV FFVTCFFLSI FSYGIVAPAG LFVPVIVTGA SYGRFVGMLL 480
481 GSNSNLNHGL FAVLGAASFL GGTMR
|
| Detection Method: |  |
| Confidence: | 57.0 |
| Match: | 1kplA |
| Description: | Clc chloride channel |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| anion channel activity | 6.77290758049983 | bayes_pls_golite062009 |
| chloride channel activity | 6.77290758049983 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 6.08111514985329 | bayes_pls_golite062009 |
| voltage-gated chloride channel activity | 5.99544422864122 | bayes_pls_golite062009 |
| voltage-gated anion channel activity | 5.99544422864122 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.07840957725271 | bayes_pls_golite062009 |
| ion channel activity | 4.93164650815682 | bayes_pls_golite062009 |
| substrate-specific channel activity | 4.81149777353187 | bayes_pls_golite062009 |
| channel activity | 4.78965126968592 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 4.78965126968592 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.67227438984104 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 4.27956097534048 | bayes_pls_golite062009 |
| voltage-gated channel activity | 4.255638017629 | bayes_pls_golite062009 |
| gated channel activity | 4.1072949331811 | bayes_pls_golite062009 |
| transporter activity | 2.94995161862691 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.84443650880263 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.82470397063503 | bayes_pls_golite062009 |
|
Region A: Residues: [506-763] |
1 11 21 31 41 51
| | | | | |
1 MTVSTCVILL ELTNNLLLLP MMMVVLLISK TVADGFNANI YNLIMKLKGF PYLYSHAEPY 60
61 MRQLLVGDVV TGPLQVFNGI EKVETIVHVL KTTNHNGFPV VDGPPLAAAP VLHGLILRAH 120
121 ILTLLKKRVF MPSPVACDSN TLSQFKAEEF AKKGSGRSDK IEDVELSEEE LNMYLDLHPF 180
181 SNASPYTVVE TMSLAKALIL FREVGIRHLL VIPKTSNRPP VVGILTRHDF MPEHILGLHP 240
241 SVSRSKWKRL RIRLPFFS
|
| Detection Method: | |
| Confidence: | 17.522879 |
| Match: | 2cu0A |
| Description: | No description for 2cu0A was found. |
