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Protein Overview: HMA1_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..165] PSI-BLAST 16.0 Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis
2 View Details [166..819] PSI-BLAST 110.0 Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • metal ion transmembrane transporter activity
  • 5.4007166857771 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
  • 4.79570221435856 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 4.61622753861072 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 4.52484959112186 bayes_pls_golite062009
  • copper chaperone activity
  • 4.52005853558976 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 4.12792340516867 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
  • 4.10264569844449 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
  • 3.70964017127302 bayes_pls_golite062009
  • copper-transporting ATPase activity
  • 3.5835731964035 bayes_pls_golite062009
  • copper-exporting ATPase activity
  • 3.51025551246238 bayes_pls_golite062009
  • copper ion transmembrane transporter activity
  • 3.4491370907439 bayes_pls_golite062009
  • copper ion binding
  • 3.42682876539918 bayes_pls_golite062009
  • metallochaperone activity
  • 3.38720397498211 bayes_pls_golite062009
  • copper-dependent protein binding
  • 3.33681042012554 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
  • 3.27250923701445 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
  • 2.98847682261773 bayes_pls_golite062009
  • transition metal ion binding
  • 2.6049784579434 bayes_pls_golite062009
  • transporter activity
  • 2.43435890488191 bayes_pls_golite062009
  • transmembrane transporter activity
  • 2.32163502360862 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 2.28845421748925 bayes_pls_golite062009
  • superoxide dismutase copper chaperone activity
  • 2.12771281719585 bayes_pls_golite062009
  • metal ion binding
  • 1.84981492985167 bayes_pls_golite062009
  • cation binding
  • 1.84981492985167 bayes_pls_golite062009
  • binding
  • 1.84926272403445 bayes_pls_golite062009
  • ion binding
  • 1.84670327188553 bayes_pls_golite062009
  • primary active transmembrane transporter activity
  • 1.62116507842838 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
  • 1.61680623728503 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
  • 1.59572740343301 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
  • 1.5925429451548 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
  • 1.59219836319916 bayes_pls_golite062009
  • active transmembrane transporter activity
  • 1.53883152283038 bayes_pls_golite062009
  • ATPase activity
  • 1.12732384636594 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 1.1123150216263 bayes_pls_golite062009
  • pyrophosphatase activity
  • 1.04872000948037 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 1.03270166246194 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 1.02977205960797 bayes_pls_golite062009
  • ATPase activity, coupled
  • 1.02520458852568 bayes_pls_golite062009
  • cation-transporting ATPase activity
  • 0.75722873989123 bayes_pls_golite062009
  • protein binding
  • 0.670126340301284 bayes_pls_golite062009
  • hydrolase activity
  • 0.00905715062495194 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle