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Protein Overview: asn1

General Information:
Name(s) found: asn1 / SPBC119.10 [Sanger Pombe]
Description(s) found:
Found 15 descriptions.
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  • asparagine synthetase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 557 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: asparagine biosynthetic process [IMPLink to PubMed article]
    Molecular Function: ATP binding [IEA]
    asparagine synthase (glutamine-hydrolyzing) activity [IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGILAVHHV AEDIEAFKPK ALHLSKQLRH RGPDWSGKAI RNQTILCHER LAIVGVESGA  60
   61 QPLVSDDGKL VLTVNGEIYN HLKLRENLKG NYKFKTYSDC EVILYLYREH GPACANMLDG 120
  121 MFSWVLYDQD KDKVVAARDP IGITTLYQGF SSDSPDTAYF ASELKALHPV CDKIIAFPPG 180
  181 HYYDSETKQT VRYFKPSWWD ENKIPSNPVD YKLLRETLEA SVRKRLMAEV PYGVLLSGGL 240
  241 DSSLIASIAA RETEKLANST SQSEEARTIT AWPKLHSFAI GLPGSPDLLA ARKVADFLHT 300
  301 FHHEHTFTID EGLDALRDVI YHLETYDVTT IRASTPMYLL SRKIKAQGVK MVLSGEGSDE 360
  361 IFGGYLYFGN APSREAFHSE CVRRVKNLHL SDCLRANKST MAWGLEARVP FLDKDFLEVA 420
  421 LNIDPEEKMY INGRKEKYIL RKAFDTTHDS SLQPYLPQDI LWRQKEQFSD GVGYSWIDAL 480
  481 KDTAELCISD DEFALPRREW GDDIPTTKEA FWYRKLFDEI FPRQCADTVM RWVPKAEWGC 540
  541 PEDPSGRYQA GHVAALK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..557] PSI-BLAST 139.0 Asparagine synthetase B, C-terminal domain; Asparagine synthetase B, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • asparagine synthase (glutamine-hydrolyzing) activity
    		•  3.86770527955716 bayes_pls_golite062009
  • asparaginase activity
    		•  2.94567124791739 bayes_pls_golite062009
  • peptidase activity
    		•  1.76298553502805 bayes_pls_golite062009
  • DNA binding
    		•  1.66643360311025 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.65897778831304 bayes_pls_golite062009
  • endopeptidase activity
    		•  1.58381740825719 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  1.56290563467621 bayes_pls_golite062009
  • acid-ammonia (or amide) ligase activity
    		•  1.41109692769794 bayes_pls_golite062009
  • N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
    		•  1.2528157874993 bayes_pls_golite062009
  • catalytic activity
    		•  1.19663085909195 bayes_pls_golite062009
  • binding
    		•  1.18139971903068 bayes_pls_golite062009
  • carbon-nitrogen ligase activity, with glutamine as amido-N-donor
    		•  1.17174228126736 bayes_pls_golite062009
  • hydrolase activity
    		•  1.05106912722792 bayes_pls_golite062009
  • protein binding
    		•  1.03373728327879 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle