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View Structure Prediction Details

Protein: asn1
Organism: Schizosaccharomyces pombe
Length: 557 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for asn1.

Description E-value Query
Range
Subject
Range
ASNS_TRIVS - Asparagine synthetase [glutamine-hydrolyzing] OS=Triphysaria versicolor GN=AS PE=2 SV=3
542.0 [0..1] [557..1]
gi|6049843 - gi|6049843|gb|AAF02776.1|AF190729_1 asparagine synthetase [Helianthus annuus]
536.0 [0..1] [557..1]
gi|3132675 - gi|3132675|gb|AAC16325.1| asparagine synthetase [Elaeagnus umbellata]
533.0 [0..1] [556..1]
gi|218197933 - gi|218197933|gb|EEC80360.1| hypothetical protein OsI_22459 [Oryza sativa Indica Group]
ASNS_ORYSA - Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetas...
ASNS2_ORYSJ - Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Oryza sativa subsp. japonica GN=Os06g0265000 PE=2...
531.0 [0..1] [557..1]
gi|3859534, gi|2... - gi|3859534|gb|AAC72836.1| asparagine synthetase [Arabidopsis thaliana], pir||T51888 asparagine synth...
531.0 [0..1] [556..1]
gi|22208544 - gi|22208544|gb|AAM94340.1| asparagine synthetase [Striga hermonthica]
530.0 [0..1] [556..1]
gi|53680379 - gi|53680379|gb|AAU89392.1| glutamine-dependent asparagine synthetase [Triticum aestivum]
528.0 [0..1] [557..1]

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Predicted Domain #1
Region A:
Residues: [1-557]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGILAVHHV AEDIEAFKPK ALHLSKQLRH RGPDWSGKAI RNQTILCHER LAIVGVESGA  60
   61 QPLVSDDGKL VLTVNGEIYN HLKLRENLKG NYKFKTYSDC EVILYLYREH GPACANMLDG 120
  121 MFSWVLYDQD KDKVVAARDP IGITTLYQGF SSDSPDTAYF ASELKALHPV CDKIIAFPPG 180
  181 HYYDSETKQT VRYFKPSWWD ENKIPSNPVD YKLLRETLEA SVRKRLMAEV PYGVLLSGGL 240
  241 DSSLIASIAA RETEKLANST SQSEEARTIT AWPKLHSFAI GLPGSPDLLA ARKVADFLHT 300
  301 FHHEHTFTID EGLDALRDVI YHLETYDVTT IRASTPMYLL SRKIKAQGVK MVLSGEGSDE 360
  361 IFGGYLYFGN APSREAFHSE CVRRVKNLHL SDCLRANKST MAWGLEARVP FLDKDFLEVA 420
  421 LNIDPEEKMY INGRKEKYIL RKAFDTTHDS SLQPYLPQDI LWRQKEQFSD GVGYSWIDAL 480
  481 KDTAELCISD DEFALPRREW GDDIPTTKEA FWYRKLFDEI FPRQCADTVM RWVPKAEWGC 540
  541 PEDPSGRYQA GHVAALK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 139.0
Match: 1ct9A
Description: Asparagine synthetase B, C-terminal domain; Asparagine synthetase B, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
asparagine synthase (glutamine-hydrolyzing) activity 3.86770527955716 bayes_pls_golite062009
asparaginase activity 2.94567124791739 bayes_pls_golite062009
peptidase activity 1.76298553502805 bayes_pls_golite062009
DNA binding 1.66643360311025 bayes_pls_golite062009
nucleic acid binding 1.65897778831304 bayes_pls_golite062009
endopeptidase activity 1.58381740825719 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 1.56290563467621 bayes_pls_golite062009
acid-ammonia (or amide) ligase activity 1.41109692769794 bayes_pls_golite062009
N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity 1.2528157874993 bayes_pls_golite062009
catalytic activity 1.19663085909195 bayes_pls_golite062009
binding 1.18139971903068 bayes_pls_golite062009
carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.17174228126736 bayes_pls_golite062009
hydrolase activity 1.05106912722792 bayes_pls_golite062009
protein binding 1.03373728327879 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle