General Information: |
|
Name(s) found: |
nhr-1 /
CE34353
[WormBase]
|
Description(s) found:
SHOW ONLY BEST |
|
Organism: | Caenorhabditis elegans |
Length: | 445 amino acids |
Gene Ontology: |
|
Cellular Component: |
nucleus
[IEA]
|
Biological Process: |
regulation of transcription, DNA-dependent
[IEA]
|
Molecular Function: |
DNA binding
[IEA]
transcription factor activity [IEA] zinc ion binding [IEA] steroid hormone receptor activity [IEA] sequence-specific DNA binding [IEA] steroid binding [IEA] |
Sequence: |
|
Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MNGTLADQLQ SHLANYGQPM VNSQRNEDPS MYMNGSAASV SHTNGSSSMG NDQKFPSYKR 60 61 MAQRRKVPEG ELCAVCSDLA TGYHYGVASC NGCKTFFRRT IVSEQTFICQ YNGNCDVNKN 120 121 IRCACRHCRF NKCLLVGMDA KALQIPAIQN DRDRIGPTKK IKMSSGSDDE QATTPHRLQD 180 181 QEIIDQLTQV EGLCQELRRC IIPEVTGVTH ALTSPCLLFE TTDLKVDVSL TNTIFKELFP 240 241 ASMNDIRMWN IREMRICIEW AKTFDVYQRL NLFDQFALVR NFAFAFNLLN RVFYSPDHGP 300 301 DKIVFQNGAF IMRQPQQQVQ LSGCRPIYTR QMDEIMIPFR KLQLSVAEFA TFKAALFFNP 360 361 DALDLSPQAK QEVFEERNKY LGGLFTCITQ KIGIPTGVQK YGSLLMMTAS IQNILAQNEE 420 421 NMQVMELFKN WEVDPFVKEL CMKRA |
SHOWING SINGLE HITS. [ Hide Single Hits ]
New Feature: Upload Your Own Microscopy Data
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..155] | 25.522879 | Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter | |
2 | View Details | [156..445] | 42.154902 | Crystal Structure of the RARbeta/RXRalpha Ligand Binding Domain Heterodimer in Complex with 9-cis Retinoic Acid and a Fragment of the TRAP220 Coactivator |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 | No functions predicted. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2 |
|
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)