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Protein Overview: asp-2

General Information:
Name(s) found: asp-2 / CE33320 [WormBase]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • WBGene00000215 locus:asp-2 status:Partially_confirmed UniProt:Q86NE1 protein_id:CCD65451.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 635 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: cell death [IMPLink to PubMed article]
    proteolysis [IEALink to PubMed article]
    Molecular Function: aspartic-type endopeptidase activity [IEALink to PubMed article]
    pepsin A activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIYSKLLKE GKWSDYKLQQ DQLRSDAYAA GVDDYEHAGY YGSDSASGIL GFDTVSFGGI  60
   61 SESQLIVPDT VVATAEDIDG IMGLGFLANS QQNIYPPFVN AVGQKLVDPI FHVYLGNRPN 120
  121 RAGQITFGGQ DTQNCAKVKQ YHPLTTGAAY QFYMTSVSSG AYSARNGWTA LSDTASSIIY 180
  181 GPKAIVAGIA DAAGATSIFQ IKIISGMQNL FLLLALVAAA LAAVVQVPLV KIEPYRNRLI 240
  241 REGRWVQYRK DREIRRFMMN KQSNDMSVGQ YVNDYEDEAY VGNITIGTPQ QQFKVILDTG 300
  301 SSNLWIPDIT CGTKPENCST VPACRGIICQ FECDDQACCG AGANYTDSCF YQNKFDASKS 360
  361 SSYKTNGRNF IIEYGTGSAR GFLGQDTITF GGIGEPQLAV PNTVFGQATS LAAFFEGQPL 420
  421 DGILGLAFKS IAVDQITPPF INAINQNLVD LPLFTVFLEH EGDQNGVQGG VYTYGGIDTK 480
  481 NCGPVIAYQP LSSATYYQFK MSAIGSGSYH SSKGWQVISD TGTSLIGGPK AYVSAIADAV 540
  541 GATWRDDYGV YILPCSAKIN TLDITIGNQV YNIDSSNTII PLGDGSNNCI YAIFPFSSGG 600
  601 FGPSWILGDP FIRQYCNIYD VGTQRVGFAK SLQSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..262] FFAS03 6.94 THE CRYSTAL STRUCTURE AND PROPOSED AMINO ACID SEQUENCE OF A PEPSIN FROM ATLANTIC COD (GADUS MORHUA)
    2 View Details [263..635] PSI-BLAST 82.0 Crystal Structure of an activation intermediate of Cathepsin E

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aspartic-type endopeptidase activity
    		•  7.1950479010578 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  7.1950479010578 bayes_pls_golite062009
  • peptidase activity
    		•  5.36401787310411 bayes_pls_golite062009
  • endopeptidase activity
    		•  5.03421181427683 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.99161386085417 bayes_pls_golite062009
  • hydrolase activity
    		•  4.10185808446217 bayes_pls_golite062009
  • catalytic activity
    		•  1.43233300875859 bayes_pls_golite062009
  • protein binding
    		•  1.27308767156327 bayes_pls_golite062009
  • binding
    		•  1.14828715723134 bayes_pls_golite062009
  • receptor binding
    		•  1.05970464759872 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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