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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: asp-2
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIYSKLLKE GKWSDYKLQQ DQLRSDAYAA GVDDYEHAGY YGSDSASGIL GFDTVSFGGI  60
   61 SESQLIVPDT VVATAEDIDG IMGLGFLANS QQNIYPPFVN AVGQKLVDPI FHVYLGNRPN 120
  121 RAGQITFGGQ DTQNCAKVKQ YHPLTTGAAY QFYMTSVSSG AYSARNGWTA LSDTASSIIY 180
  181 GPKAIVAGIA DAAGATSIFQ IKIISGMQNL FLLLALVAAA LAAVVQVPLV KIEPYRNRLI 240
  241 REGRWVQYRK DREIRRFMMN KQSNDMSVGQ YVNDYEDEAY VGNITIGTPQ QQFKVILDTG 300
  301 SSNLWIPDIT CGTKPENCST VPACRGIICQ FECDDQACCG AGANYTDSCF YQNKFDASKS 360
  361 SSYKTNGRNF IIEYGTGSAR GFLGQDTITF GGIGEPQLAV PNTVFGQATS LAAFFEGQPL 420
  421 DGILGLAFKS IAVDQITPPF INAINQNLVD LPLFTVFLEH EGDQNGVQGG VYTYGGIDTK 480
  481 NCGPVIAYQP LSSATYYQFK MSAIGSGSYH SSKGWQVISD TGTSLIGGPK AYVSAIADAV 540
  541 GATWRDDYGV YILPCSAKIN TLDITIGNQV YNIDSSNTII PLGDGSNNCI YAIFPFSSGG 600
  601 FGPSWILGDP FIRQYCNIYD VGTQRVGFAK SLQSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle