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Protein Overview: atgp-1

General Information:
Name(s) found: atgp-1 / CE32183 [WormBase]
Description(s) found:
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  • WBGene00000224 locus:atgp-1 status:Confirmed UniProt:Q9XVU3 protein_id:CAB02316.2 [WormBase]
  • gi|32565753|ref|NP_503064.2| Amino acid Transporter GlycoProtein subunit family member (atgp-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|24817328|emb|CAB02316.2| C. elegans protein F26D10.9a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • CE32183 WBGene00000224 locus:atg-1 Sugar (and other) transporters status:Confirmed TR:Q9XVU3 protein_id:CAB02316.2 [wormpep150.fasta]
  • 32183 WBGene00000224 locus:atg-1 Sugar (and other) transporters status:Confirmed TR:Q9XVU3 protein_id:CAB02316.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • alpha amylase, catalytic domain containing protein family member (69.3 kD) (4S215) [Caenorhabditis elegans]gi|24817328|emb|CAB02316.2| Hypothetical protein F26D10.9 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:atg-1 Sugar (and other) transporters status:Partially_confirmed TR:Q9XVU3 protein_id:CAB02316.2 [wormpep115.fasta.reversed]
  • CE32183 WBGene00000224 locus:atgp-1 Sugar (and other) transporters status:Confirmed UniProt:Q9XVU3_CAEEL protein_id:CAB02316.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32183 WBGene00000224 locus:atgp-1 Sugar (and other) transporters status:Confirmed UniProt:Q9XVU3_CAEEL protein_id:CAB02316.2| [wormORF-contam.fasta]
  • Amino acid Transporter Glycoprotein subunit family member (atg-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F26D10.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE32183 WBGene00000224 locus:atgp-1 Sugar (and other) transporters status:Confirmed UniProt:Q9XVU3 protein_id:CAB02316.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE32183 WBGene00000224 locus:atgp-1 status:Confirmed UniProt:Q9XVU3 protein_id:CAB02316.2 [wormpep246-ecoli-contam.fasta]
  • Amino acid Transporter GlycoProtein subunit OS=Caenorhabditis elegans GN=atgp-1 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 613 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    plasma membrane [IDALink to PubMed article]
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    trehalose catabolic process [IEALink to PubMed article]
    Molecular Function: alpha-amylase activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]
    cation binding [IEALink to PubMed article]
    alpha,alpha-phosphotrehalase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKDALIAE EGTNFGGSSS GDIAVFDKTA EVVNFELEPK PIGLTKEQLE KYRNDPFWKP  60
   61 VRTILFVLFW LAWVLMFAGA IAIVVLSPKC AEKQKPDWWQ TKVSYQLLTA TFYDSDNDGV 120
  121 GDFAGISQKI DFLRKIGVTT VYPTPVIKIH KDEYFNSYDV VDHNSVDERF GTEEQFKELI 180
  181 DTVHNRAMYL VMDLPVSTID LSHPWFESRD ESKFVIAKPT DPGFNESNFY PFHGANNIKY 240
  241 LGYPSSQNPV LNWKNADVKS TINGAIQKFL DLGVDGFHID HISQLAVDSK GRPNHDEAVK 300
  301 VLEELTKSVQ IYVESRDELV DKKIVLFSSL KDVEDLHVKA TETGLLHYVI DNSFANLDEK 360
  361 KCQPHVAKCV HDALNAAYQR HEVAKYTPHW QFSNSEASRL ASRFESATAH LLSFLQLTLP 420
  421 GANSVYYGQE YGLKDAMSKN GEFKQMGVMQ WYPAGKDHHG FSGNDAPIFF PESDDKLELD 480
  481 NYNTQFETEN SALKIYRKLA KLRQRDEALI VGETVRDELI NEDVILFSRY VQAVNNTATG 540
  541 STFIVALNFG DKEQKIDFSI EPASKLIPSN KDLLNAEISV VTANVTDYRV RDHHNFVESP 600
  601 LVLPPKQAVL LKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] deduced N/A No confident structure predictions are available.
    2 View Details [95..613] PSI-BLAST 111.0 CRYSTAL STRUCTURE OF B. CEREUS OLIGO-1,6-GLUCOSIDASE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  5.72449317118946 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  5.38610972475995 bayes_pls_golite062009
  • hydrolase activity
    		•  4.42755848458375 bayes_pls_golite062009
  • hexosaminidase activity
    		•  2.6383220379017 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.46414496294137 bayes_pls_golite062009
  • chitinase activity
    		•  2.45357334610104 bayes_pls_golite062009
  • trehalase activity
    		•  2.36352354889841 bayes_pls_golite062009
  • beta-N-acetylhexosaminidase activity
    		•  2.12259271877403 bayes_pls_golite062009
  • alpha-amylase activity
    		•  2.09193270404736 bayes_pls_golite062009
  • amylase activity
    		•  2.03484942782894 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • glucosidase activity
    		•  1.63850753281742 bayes_pls_golite062009
  • transporter activity
    		•  1.28975867300692 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  1.09355005521552 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  1.08320932161637 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.06875155491269 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.798668027833638 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  0.726290283967376 bayes_pls_golite062009
  • galactosidase activity
    		•  0.67508380605029 bayes_pls_golite062009
  • binding
    		•  0.601963252939415 bayes_pls_golite062009
  • alpha-glucosidase activity
    		•  0.54694531123812 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.504504272479309 bayes_pls_golite062009
  • signal transducer activity
    		•  0.504504272479309 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.4998423581103 bayes_pls_golite062009
  • maltase activity
    		•  0.442635030512661 bayes_pls_golite062009
  • sugar binding
    		•  0.36459095255871 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.266938437560648 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.247544462005515 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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