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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: atgp-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKDALIAE EGTNFGGSSS GDIAVFDKTA EVVNFELEPK PIGLTKEQLE KYRNDPFWKP  60
   61 VRTILFVLFW LAWVLMFAGA IAIVVLSPKC AEKQKPDWWQ TKVSYQLLTA TFYDSDNDGV 120
  121 GDFAGISQKI DFLRKIGVTT VYPTPVIKIH KDEYFNSYDV VDHNSVDERF GTEEQFKELI 180
  181 DTVHNRAMYL VMDLPVSTID LSHPWFESRD ESKFVIAKPT DPGFNESNFY PFHGANNIKY 240
  241 LGYPSSQNPV LNWKNADVKS TINGAIQKFL DLGVDGFHID HISQLAVDSK GRPNHDEAVK 300
  301 VLEELTKSVQ IYVESRDELV DKKIVLFSSL KDVEDLHVKA TETGLLHYVI DNSFANLDEK 360
  361 KCQPHVAKCV HDALNAAYQR HEVAKYTPHW QFSNSEASRL ASRFESATAH LLSFLQLTLP 420
  421 GANSVYYGQE YGLKDAMSKN GEFKQMGVMQ WYPAGKDHHG FSGNDAPIFF PESDDKLELD 480
  481 NYNTQFETEN SALKIYRKLA KLRQRDEALI VGETVRDELI NEDVILFSRY VQAVNNTATG 540
  541 STFIVALNFG DKEQKIDFSI EPASKLIPSN KDLLNAEISV VTANVTDYRV RDHHNFVESP 600
  601 LVLPPKQAVL LKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle