Protein Overview: dli-1

General Information:
Name(s) found:	dli-1 / CE30893 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00001007 locus:dli-1 status:Confirmed UniProt:G5ECK7 protein_id:CAC42262.2 [WormBase] gi\|25151905\|ref\|NP_502519.2\| Dynein Light Intermediate chain family member (dli-1) [Caenorhabditis elegans] [NCBI NR] gi\|21684779\|emb\|CAD37351.1\| C. elegans protein C39E9.14b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] gi\|21615437\|emb\|CAC42262.2\| C. elegans protein C39E9.14b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] [wormpep88.fasta] CE30893 WBGene00001007 locus:dli-1 status:Confirmed TR:Q95NT3 protein_id:CAC42262.2 [wormpep150.fasta] 30893 WBGene00001007 locus:dli-1 status:Confirmed TR:Q95NT3 protein_id:CAC42262.2 [wormpep130-phg-ecoli-orf-rand.fasta] cytoplasmic Dynein Light chain, Intermediate type, Dynein Light Intermediate chain (48.4 kD) (dli-1) [Caenorhabditis elegans]gi\|21615437\|emb\|CAC42262.2\| Hypothetical protein C39E9.14b [Caenorhabditis elegans]gi\|21684779\|emb\|CAD37351.1\| Hypothetical prot [nrdb_11152004_Chlamydomonas] locus:dli-1 status:Confirmed TR:Q95NT3 protein_id:CAC42262.2 [wormpep115.fasta.reversed] CE30893 WBGene00001007 locus:dli-1 status:Confirmed UniProt:Q95NT3_CAEEL protein_id:CAD37351.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE30893 WBGene00001007 locus:dli-1 status:Confirmed UniProt:Q95NT3_CAEEL protein_id:CAD37351.1\| [wormORF-contam.fasta] Dynein Light Intermediate chain family member (dli-1) [Caenorhabditis elegans] [nr-271106-contam.fasta] Hypothetical protein C39E9.14b [Caenorhabditis elegans] [nr-271106-contam.fasta] CE30893 WBGene00001007 locus:dli-1 status:Confirmed UniProt:Q95NT3 protein_id:CAD37351.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE30893 WBGene00001007 locus:dli-1 status:Confirmed UniProt:G5ECK7 protein_id:CAC42262.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] Isoform of G5ED34, Dynein Light Intermediate chain OS=Caenorhabditis elegans GN=dli-1 PE=1 SV=1 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	441 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	negative regulation of vulval development [IMP] pronuclear migration [IMP] hermaphrodite genitalia development [IMP ] locomotory behavior [IMP] morphogenesis of an epithelium [IMP] embryonic development ending in birth or egg hatching [IMP ]
Molecular Function:	motor activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPTAQPLEF DDTANAVLPV LYSSTDEEVG IWRELLASKK TNTNQGSTVI VLGDNRSGKS  60
   61 SLLSRLDKSD RTVKPKSLLG YRVLHVQNDA RDASYAYQLG TAGANLNPSE LLQIPVWSLD 120
  121 GNAACASLLK HALPATPAEA IFILTASIDN PNLIHSLKRW ANVCTEQAQK HFTKEDLKAG 180
  181 RSQQEKMWQE YVDPVQSQMS TSVVGSFADE HNLLPLDQGT LTENCGVTFM VVITKSDLGK 240
  241 EFTDAQFAKI SIQLRKFCLS LGATLVFTSA KETKNIQLLQ KYIVHRSFGT AFTSAAQVIE 300
  301 RESIFVPAGW DGEKKIDIIR ESIPDVDSAL EPTRDKLRPV AKEQLIEAEE DQAFLKKLMD 360
  361 ILATSTTTAA PKPRTMQEEP TDKDSPLANF FSNLLNKDKP SKVSSPSTVS QPMDAAATQA 420
  421 QLDRLLKSAQ SPKPQPRDSD A

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	hcp-1	hcp1 IP from december2004	Cheeseman, I.M., et al. (2005)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
microtubule motor activity	7.68336791348661	bayes_pls_golite062009
motor activity	4.04927796049806	bayes_pls_golite062009
plus-end-directed microtubule motor activity	3.89478272344579	bayes_pls_golite062009
nucleoside-triphosphatase activity	2.9316157348091	bayes_pls_golite062009
pyrophosphatase activity	2.85508132376901	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	2.83578652703908	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.83259287122192	bayes_pls_golite062009
tubulin binding	2.67743463093593	bayes_pls_golite062009
microtubule binding	2.59155206524122	bayes_pls_golite062009
transporter activity	2.54024930442614	bayes_pls_golite062009
cytoskeletal protein binding	2.4101693596493	bayes_pls_golite062009
ATPase activity	2.3671333448422	bayes_pls_golite062009
transmembrane transporter activity	2.35987232569028	bayes_pls_golite062009
ATPase activity, coupled	2.15516086601295	bayes_pls_golite062009
binding	2.01755875920323	bayes_pls_golite062009
actin binding	1.75397031486306	bayes_pls_golite062009
hydrolase activity	1.55579437761895	bayes_pls_golite062009
microfilament motor activity	1.28029120876672	bayes_pls_golite062009
substrate-specific transporter activity	1.26618119830599	bayes_pls_golite062009
purine nucleotide binding	0.912853112793192	bayes_pls_golite062009
nucleotide binding	0.905342574142397	bayes_pls_golite062009
purine ribonucleotide binding	0.904115761720541	bayes_pls_golite062009
ribonucleotide binding	0.904053997411779	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.877711904204486	bayes_pls_golite062009
actin filament binding	0.728264616959762	bayes_pls_golite062009
active transmembrane transporter activity	0.403546959736573	bayes_pls_golite062009
ATP binding	0.38929752840764	bayes_pls_golite062009
adenyl ribonucleotide binding	0.364108656344062	bayes_pls_golite062009
adenyl nucleotide binding	0.356069365520539	bayes_pls_golite062009
ion transmembrane transporter activity	0.328995639437459	bayes_pls_golite062009
primary active transmembrane transporter activity	0.264741960233164	bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity	0.252628307425696	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	0.191104435852081	bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances	0.190037546554641	bayes_pls_golite062009
ATPase activity, coupled to movement of substances	0.189653398557061	bayes_pls_golite062009
GTPase activity	0.105546189348878	bayes_pls_golite062009
protein binding	0.071010918255742	bayes_pls_golite062009
minus-end-directed microtubule motor activity	0.068779631341469	bayes_pls_golite062009
structural constituent of cytoskeleton	0.0111338193708552	bayes_pls_golite062009

No functions predicted.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..239]	PSI-BLAST	46.221849	Structure of doubly prenylated Ypt1:GDI complex
2	View Details	[240..441]	Pfam	16.585027	No description for PF05783.2 was found. No confident structure predictions are available.

Protein Overview: dli-1

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: