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Protein Overview: csp-1

General Information:
Name(s) found: csp-1 / CE30016 [WormBase]
Description(s) found:
Found 23 descriptions.
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  • WBGene00000819 locus:csp-1 status:Confirmed UniProt:G5EG94 protein_id:CAD18879.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 268 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEALink to PubMed article]
    apoptosis [IEALink to PubMed article]
    Molecular Function: caspase activity [IEALink to PubMed article]
    cysteine-type peptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRTDAKKSN HKHKYCYEMN SNPRGTVLIL SNENFKNMER RVGTKQDEVN LTKLFQKLQY  60
   61 TVICKRNLEA ESMLEAIKEF AEMAHTDSII LFLLSHGDGA GSVFGIDDMP VNVMEVSTYL 120
  121 AYHQNLLLKP KWVAVSACRG GKLNMGVPVD GLPALEDKCA PISKFWNLMM SRIMPGTFTS 180
  181 LNADVIISFS TTDGFTSYRD EEAGTWYIKS MCKVFNKHSK TMHLLDILTE TGRNVVTKYE 240
  241 NVQGNVVLKQ APEILSRLTK QWHFSRSM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..268] PSI-BLAST 64.69897 Caspase-7

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  3.24815349282067 bayes_pls_golite062009
  • protein binding
    		•  2.96725373477762 bayes_pls_golite062009
  • binding
    		•  2.91261616137775 bayes_pls_golite062009
  • cyclin-dependent protein kinase regulator activity
    		•  2.60103365510479 bayes_pls_golite062009
  • hydrolase activity
    		•  2.51110071893544 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  2.37850336421322 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.07426831021634 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
    		•  1.82979469421101 bayes_pls_golite062009
  • endopeptidase activity
    		•  1.58137850574981 bayes_pls_golite062009
  • cyclin-dependent protein kinase inhibitor activity
    		•  1.38256499817012 bayes_pls_golite062009
  • catalytic activity
    		•  1.03907950272772 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.0737251792690711 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle