YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: daf-16

General Information:
Name(s) found: daf-16 / CE28773 [WormBase]
Description(s) found:
Found 24 descriptions.
SHOW ALL
  • WBGene00000912 locus:daf-16 Forkhead box protein O status:Confirmed UniProt:O16850 protein_id:CCD71852.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 510 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article][IEALink to PubMed article]
    cytoplasm [IDALink to PubMed articleLink to PubMed article]
    Biological Process: response to heat [IEPLink to PubMed article]
    dauer larval development [IGILink to PubMed article]
    insulin receptor signaling pathway [IDALink to PubMed article]
    determination of adult lifespan [IGILink to PubMed article][IMPLink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    positive regulation of transcription from RNA polymerase II promoter [IDALink to PubMed article]
    Molecular Function: transcription factor activity [IDALink to PubMed article][IEALink to PubMed article]
    protein binding [IPILink to PubMed article]
    sequence-specific DNA binding [IDALink to PubMed article][IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEMLVDQGT DASSSASTST SSVSRFGADT FMNTPDDVMM NDDMEPIPRD RCNTWPMRRP  60
   61 QLEPPLNSSP IIHEQIPEED ADLYGSNEQC GQLGGASSNG STAMLHTPDG SNSHQTSFPS 120
  121 DFRMSESPDD TVSGKKTTTR RNAWGNMSYA ELITTAIMAS PEKRLTLAQV YEWMVQNVPY 180
  181 FRDKGDSNSS AGWKNSIRHN LSLHSRFMRI QNEGAGKSSW WVINPDAKPG RNPRRTRERS 240
  241 NTIETTTKAQ LEKSRRGAKK RIKERALMGS LHSTLNGNSI AGSIQTISHD LYDDDSMQGA 300
  301 FDNVPSSFRP RTQSNLSIPG SSSRVSPAIG SDIYDDLEFP SWVGESVPAI PSDIVDRTDQ 360
  361 MRIDATTHIG GVQIKQESKP IKTEPIAPPP SYHELNSVRG SCAQNPLLRN PIVPSTNFKP 420
  421 MPLPGAYGNY QNGGITPINW LSTSNSSPLP GIQSCGIVAA QHTVASSSAL PIDLENLTLP 480
  481 DQPLMDTMDV DALIRHELSQ AGGQHIHFDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] MSA 1.362993 View MSA. No confident structure predictions are available.
    2 View Details [109..228] PSI-BLAST 22.09691 Afx (Foxo4)
    3 View Details [229..510] MSA 4.421995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle