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Protein Overview: CE27915

General Information:
Name(s) found: CE27915 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00008546 status:Confirmed UniProt:Q95QM8 protein_id:CAC42276.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 712 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    carbohydrate biosynthetic process [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    metabolic process [IEALink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    Molecular Function: sugar binding [IEALink to PubMed article]
    glutamine-fructose-6-phosphate transaminase (isomerizing) activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGIFAYLNF LTPKKRSEIV DILVQGLQRM EYRGYDSAGI AIDGSNEIES PHSSVALLRK  60
   61 AGKVSVLSDF IKESSSDLDM DMEYNIHCGI AHTRWATHGS PRDVNSHPHR SNDKNEFLVV 120
  121 HNGIITNYRE IKEYLEKKGH KFESETDTEV IAKLAQHIHD RYPDFSFRQL VETVIQQLEG 180
  181 AFALAFKSSR FPGQLVASRR GSPLLVGIKS NSRLQTNHFP VSFSKGRRFM SNHATHLRDE 240
  241 TSFVETPNNI LDLSIAVRSS NGSAKMEISD STTAVRPFDS DDWEVEYFVA SDAAAIIEHT 300
  301 KQVLFLEDDD VAFVEDGALT IHRISRHADN GEQKREVKLL EMELQEIMKG SFKTYMQKEI 360
  361 FEQPDSVVNT MRGRVLPSGQ VVLGGIKEYL PDIKRCRRLI MVACGTSYHS AIACRQILEE 420
  421 LSELPVVVEL ASDFLDRETP IFRDDVCLFI SQSGETADTL LALRYCKPRG ALTIGVTNTV 480
  481 GSSICRESHC GIHINAGPEI GVASTKAYTS QILSLLMFAL TLSDDRISMA KRREEIIDAL 540
  541 NDLPELIREV LQLDEKVLDI AKQIYKEKSL LIMGRGLNFA TCLEGALKIK ELSYMHCEGI 600
  601 MSGELKHGPL AMVDEFLSIC MVVCNDRVYK KSLNALQQVV ARKGAPIIIA DCTVPEGDLA 660
  661 GMKHILRVPK TVDCVQNILT VIPLQLLSYH IAELNGANVD RPRNLAKSVT VE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..269] PSI-BLAST 54.39794 Glutaminase domain of glucosamine 6-phosphate synthase complexed with glutamate
    2 View Details [270..377] FFAS03 2.1 "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS); Glucosamine 6-phosphate synthase, N-terminal domain
    3 View Details [378..452] PSI-BLAST 10.522879 Crystal structure of an hypothetical protein
    4 View Details [453..712] PSI-BLAST 92.30103 No description for 2pocA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  1.34295853726897 bayes_pls_golite062009
  • catalytic activity
    		•  1.19663085909195 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  1.16226272745141 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.798789250029517 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.759765292911898 bayes_pls_golite062009
  • binding
    		•  0.541510243044181 bayes_pls_golite062009
  • transferase activity
    		•  0.526806728662348 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle