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Protein Overview: taf-6.1

General Information:
Name(s) found: taf-6.1 / CE27222 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00006387 locus:taf-6.1 status:Confirmed UniProt:Q9GZI6 protein_id:CCD73650.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 470 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: transcription initiation [IEALink to PubMed article]
    regulation of transcription factor activity [IEALink to PubMed article]
    Molecular Function: transcription initiation factor activity [IEALink to PubMed article]
    RNA polymerase II transcription factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTVTIRRP SPTKTSEEPA AHQTPIFTQT AAEMLGITSL NTEAAELLEF LSREKLKEIV  60
   61 RLSAKWTQKS ARRRMAVADV EHAIRSTRQC GGLNISSVDT LNLGIQQLQP IQGTSTGIYS 120
  121 FLKSSADVDV DKEDTETFIK IPRDLRVISY PLVNEGQPVQ SEYTVNVDED DGNFFEKIVP 180
  181 EVMTMIPEKN TPSSSTTSSL QMFRDAVKTA KIDQKVGLKP STIEILTVEQ QIFMKDIITV 240
  241 CMGQDDKKRH EALYTLETDA GLQVFLPHLT ERICKSISAN ISQRCLSLII YAGRVLRSLS 300
  301 HNKACDMTVT LHHVLPALLS CCVGRNMCLR PETDNHWALR DFSAKTLVGL VRDQVDKHDA 360
  361 GRTARRLFDF SHRIFRDTGS SFSMIYGTVH ILQEFVAGPK KAAWLLTELG ETNARCKSHI 420
  421 ESGSRIGASQ LSIQEAQKLN QQILKCENSI RNRYNLQQQA PGVPINRRFH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] PSI-BLAST 20.0 TAF(II)62
    2 View Details [114..470] PSI-BLAST 37.69897 No description for 2iaeA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • general RNA polymerase II transcription factor activity
    		•  9.25279783093877 bayes_pls_golite062009
  • histone acetyltransferase activity
    		•  5.97252613675094 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
    		•  5.97252613675094 bayes_pls_golite062009
  • N-acetyltransferase activity
    		•  4.49886535711761 bayes_pls_golite062009
  • DNA binding
    		•  4.49118409263799 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.35201412176948 bayes_pls_golite062009
  • N-acyltransferase activity
    		•  4.22222466548509 bayes_pls_golite062009
  • transcription regulator activity
    		•  4.08606081850613 bayes_pls_golite062009
  • transcription initiation factor activity
    		•  3.96621818094279 bayes_pls_golite062009
  • acetyltransferase activity
    		•  3.91614625961398 bayes_pls_golite062009
  • acyltransferase activity
    		•  3.38611688546892 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  3.35015681315177 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  3.28941584139552 bayes_pls_golite062009
  • binding
    		•  3.27510691458843 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  3.1782337747057 bayes_pls_golite062009
  • transcription factor activity
    		•  2.51581622888695 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.82448881874976 bayes_pls_golite062009
  • transcription activator activity
    		•  1.25487495162413 bayes_pls_golite062009
  • transcription factor binding
    		•  1.15204005455906 bayes_pls_golite062009
  • transcription coactivator activity
    		•  1.1297723528047 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.10331930589736 bayes_pls_golite062009
  • protein binding
    		•  1.07873333188144 bayes_pls_golite062009
  • transcription cofactor activity
    		•  1.01502031330902 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.72554769377984 bayes_pls_golite062009
  • histone binding
    		•  0.218942897869955 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.0852726470007639 bayes_pls_golite062009
  • transcription corepressor activity
    		•  0.0736756545988504 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle