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Protein Overview: acr-6

General Information:
Name(s) found: acr-6 / CE24751 [WormBase]
Description(s) found:
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  • WBGene00000045 locus:acr-6 acetylcholine receptor subunit status:Partially_confirmed UniProt:Q9N4M3 protein_id:CCD73567.1 [WormBase]
  • gi|7206850|gb|AAF40009.1| Acetylcholine receptor protein 6 [Caenorhabditis elegans] [NCBI NR]
  • gi|17511137|ref|NP_491354.1| AcetylCholine Receptor family member (acr-6) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE24751 WBGene00000045 locus:acr-6 acetylcholine receptor subunit status:Predicted TR:Q9N4M3 protein_id:AAF40009.1 [wormpep150.fasta]
  • 24751 WBGene00000045 locus:acr-6 acetylcholine receptor subunit status:Predicted TR:Q9N4M3 protein_id:AAF40009.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • acetylcholine receptor (acr-6) [Caenorhabditis elegans]gi|7206850|gb|AAF40009.1| Acetylcholine receptor protein 6 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:acr-6 acetylcholine receptor subunit status:Predicted TR:Q9N4M3 protein_id:AAF40009.1 [wormpep115.fasta.reversed]
  • CE24751 acetylcholine receptor subunit status:Predicted TR:Q9N4M3 protein_id:AAF40009.1 [wormpep80.hongbin]
  • CE24751 WBGene00000045 locus:acr-6 acetylcholine receptor subunit status:Predicted UniProt:Q9N4M3_CAEEL protein_id:AAF40009.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE24751 WBGene00000045 locus:acr-6 acetylcholine receptor subunit status:Predicted UniProt:Q9N4M3_CAEEL protein_id:AAF40009.1| [wormORF-contam.fasta]
  • AcetylCholine Receptor family member (acr-6) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Acetylcholine receptor protein 6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE24751 WBGene00000045 locus:acr-6 acetylcholine receptor subunit status:Predicted UniProt:Q9N4M3 protein_id:AAF40009.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 562 amino acids

    Gene Ontology:
    Cellular Component: postsynaptic membrane [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    transport [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: neurotransmitter receptor activity [IEALink to PubMed article]
    extracellular ligand-gated ion channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLKKPAQS TQVPPAYNKI AFPSGEFNNT LTIEFKLRLD QIVDVHEKDQ VITLKGTLIH  60
   61 HWLDYRLSWN PDEFGNITLM HFPGEMLWLP DIILYNNAHG SPWVSETTQV HVSFEGRVTW 120
  121 QPPVVYDAFC NIDIEWYPYD LQICELKFGS WTYGGSQLNL IHLTTDQANE STDATGDNVW 180
  181 KVERGVDLSN YQESVEWDLL SVEGIRHKKW YPCCDYPSID ITYYLHIRRK KLFYTVNMII 240
  241 PCVCLASMTL WVTSKFLSKF VFGRGLIVFY LPCESHQKIQ LCISVLVALT LYFLMLIDII 300
  301 PPTSIVTPLI LKYLSFTMIM VALSVTCTVF VSFYNFLKMI QNIHYRAYYQ PMPRFVKHWF 360
  361 IEKLGKKLLI SRKTEQAQYH RTAQHVKQVN ALSAMNILEK QFQKTLFELE IATMAKKTVT 420
  421 AAPKTVNSIF LELPMMNRSV SVKIRKPSVK AVKNRMRRLL SIDMTDDIRG KETEEISPET 480
  481 TKDTDPDREK LRKAEKNIHF IAKTLTDERR AQEAEADWQF VSLVIDRMLL IIFSFTITIG 540
  541 TILTIFSAPT MRDNREPIAI NP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..349] PSI-BLAST 78.69897 Refined structure of the nicotinic acetylcholine receptor at 4A resolution.
    2 View Details [350..562] PSI-BLAST 37.30103 Acetylcholine receptor protein, beta chain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • acetylcholine binding
    		•  13.9752632471881 bayes_pls_golite062009
  • acetylcholine receptor activity
    		•  13.7533645836795 bayes_pls_golite062009
  • nicotinic acetylcholine-activated cation-selective channel activity
    		•  13.1511875247796 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  11.9525876011069 bayes_pls_golite062009
  • extracellular ligand-gated ion channel activity
    		•  11.7813202122163 bayes_pls_golite062009
  • excitatory extracellular ligand-gated ion channel activity
    		•  11.7813202122163 bayes_pls_golite062009
  • cation channel activity
    		•  11.7442066737514 bayes_pls_golite062009
  • ion channel activity
    		•  11.1753684044644 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  11.0903806681397 bayes_pls_golite062009
  • channel activity
    		•  11.0903806681397 bayes_pls_golite062009
  • gated channel activity
    		•  11.0397691626728 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  10.9375522860542 bayes_pls_golite062009
  • ligand-gated channel activity
    		•  9.34902726749692 bayes_pls_golite062009
  • ligand-gated ion channel activity
    		•  9.34902726749692 bayes_pls_golite062009
  • amine binding
    		•  9.11982124959723 bayes_pls_golite062009
  • chloride channel regulator activity
    		•  9.10587892909341 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  7.22265353460749 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  7.19173677417054 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  6.7875346065164 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  5.4080353535498 bayes_pls_golite062009
  • receptor activity
    		•  5.11329651194787 bayes_pls_golite062009
  • transporter activity
    		•  5.11262082564788 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  5.03439798256257 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  4.91314874981447 bayes_pls_golite062009
  • neurotransmitter binding
    		•  4.25797760547212 bayes_pls_golite062009
  • neurotransmitter receptor activity
    		•  4.15404686068319 bayes_pls_golite062009
  • signal transducer activity
    		•  4.12549692767753 bayes_pls_golite062009
  • molecular transducer activity
    		•  4.12549692767753 bayes_pls_golite062009
  • adenylate cyclase binding
    		•  3.30190657223613 bayes_pls_golite062009
  • binding
    		•  2.4916526322278 bayes_pls_golite062009
  • beta-amyloid binding
    		•  2.25766805801029 bayes_pls_golite062009
    		• 1.68370717591127 bayes_pls_golite062009
  • channel regulator activity
    		•  1.66978990310631 bayes_pls_golite062009
  • protein binding
    		•  1.45740893920165 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  1.42422063123689 bayes_pls_golite062009
  • serotonin binding
    		•  1.33584589886834 bayes_pls_golite062009
  • serotonin-activated cation-selective channel activity
    		•  1.31324203158511 bayes_pls_golite062009
  • toxin binding
    		•  1.03329843925063 bayes_pls_golite062009
  • drug binding
    		•  0.64715018605883 bayes_pls_golite062009
  • kinase binding
    		•  0.365355763029699 bayes_pls_golite062009
  • protein kinase binding
    		•  0.350601457777817 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle