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Protein Overview: vha-13

General Information:
Name(s) found: vha-13 / CE22210 [WormBase]
Description(s) found:
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  • WBGene00013025 locus:vha-13 V-type proton ATPase catalytic subunit A status:Confirmed UniProt:Q9XW92 protein_id:CAA22076.1 [WormBase]
  • pir||T27035 hypothetical protein Y49A3A.2 - Caenorhabditis elegans [NCBI NR]
  • gi|75028911|sp|Q9XW92.3|VATA_CAEEL RecName: Full=V-type proton ATPase catalytic subunit A; Short=V-ATPase subunit A; AltName: Full=Vacuolar proton pump subunit alpha; AltName: Full=V-ATPase 69 kDa subunit; AltName: Full=Vacuolar H ATPase protein 13 [NCBI NR]
  • gi|4008438|emb|CAA22076.1| C. elegans protein Y49A3A.2, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17565854|ref|NP_506559.1| Vacuolar H ATPase family member (vha-13) [Caenorhabditis elegans] [NCBI NR]
  • V-type proton ATPase catalytic subunit A OS=Caenorhabditis elegans GN=vha-13 PE=1 SV=3 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE22210 WBGene00013025 locus:vha-13 ATP synthase alpha and beta subunits \; ATP synthase ab C terminal status:Confirmed TR:Q9XW92 protein_id:CAA22076.1 [wormpep150.fasta]
  • 22210 WBGene00013025 locus:vha-13 ATP synthase alpha and beta subunits \; ATP synthase ab C terminal status:Confirmed TR:Q9XW92 protein_id:CAA22076.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • ATP synthase alpha and beta subunits ; ATP synthase ab C terminal (66.5 kD) (5O835Co) [Caenorhabditis elegans]gi|4008438|emb|CAA22076.1| Hypothetical protein Y49A3A.2 [Caenorhabditis elegans]gi|7510027|pir||T27035 hypothetical protein Y49A3A.2 - Caenorh [nrdb_11152004_Chlamydomonas]
  • ATP synthase alpha and beta subunits \; ATP synthase ab C terminal status:Confirmed TR:Q9XW92 protein_id:CAA22076.1 [wormpep115.fasta.reversed]
  • CE22210 ATP synthase alpha and beta subunits \; ATP synthase ab C terminal status:Confirmed TR:Q9XW92 protein_id:CAA22076.1 [wormpep80.hongbin]
  • CE22210 WBGene00013025 locus:vha-13 ATP synthase alpha and beta subunits \; ATP synthase ab C terminal status:Confirmed UniProt:VATA_CAEEL protein_id:CAA22076.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE22210 WBGene00013025 locus:vha-13 ATP synthase alpha and beta subunits \; ATP synthase ab C terminal status:Confirmed UniProt:VATA_CAEEL protein_id:CAA22076.1| [wormORF-contam.fasta]
  • CE22210 WBGene00013025 locus:vha-13 ATP synthase alpha and beta subunits \; ATP synthase ab C terminal status:Confirmed SW:Q9XW92 protein_id:CAA22076.1 [wormpep160-contam.fasta]
  • Vacuolar ATP synthase catalytic subunit A (V-ATPase subunit A) (Vacuolar proton pump subunit alpha) (V-ATPase 69 kDa subunit) (Vacuolar H ATPase protein 13) [nr-271106-contam.fasta]
  • Vacuolar H ATPase family member (vha-13) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y49A3A.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE22210 WBGene00013025 locus:vha-13 ATP synthase alpha and beta subunits \; ATP synthase ab C terminal status:Confirmed UniProt:Q9XW92 protein_id:CAA22076.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE22210 WBGene00013025 locus:vha-13 status:Confirmed UniProt:Q9XW92 protein_id:CAA22076.1 V-type proton ATPase catalytic subunit A [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 606 amino acids

    Gene Ontology:
    Cellular Component: proton-transporting two-sector ATPase complex [IEALink to PubMed article]
    bacterial-type flagellum [IEALink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: locomotion [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    protein transport [IEALink to PubMed article]
    flagellum assembly [IEALink to PubMed article]
    biosynthetic process [IEALink to PubMed article]
    ATP biosynthetic process [IEALink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    ciliary or flagellar motility [IEALink to PubMed article]
    protein secretion by the type III secretion system [IEALink to PubMed article]
    energy coupled proton transport, against electrochemical gradient [IEALink to PubMed article]
    ATP synthesis coupled proton transport [IEALink to PubMed article]
    Molecular Function: nucleotide binding [IEALink to PubMed article]
    ATPase activity [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]
    proton-transporting ATPase activity, rotational mechanism [IEALink to PubMed article]
    hydrogen-exporting ATPase activity, phosphorylative mechanism [IEALink to PubMed article]
    hydrogen ion transporting ATP synthase activity, rotational mechanism [IEALink to PubMed article]
    hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAESSYGFV YGVSGPVVTA EKMAGSAMYE LVRVGHQELV GEIIRLEGDY ATIQVYEETS  60
   61 GVTIGDPVLR TGKPLSVELG PGIMGSIFDG IQRPLKDIAD ITQSIYIPKG VSTNALSREA 120
  121 RWDFVVSKDL RVGGHVTGGD IIGTVDENLL IKHKILLPPS ACGTITFVAP SGQYTVEDTL 180
  181 LELEFAGRKQ KFSMLQIWPV RSPRPVTEKL AANNPLLCGQ RVLDALFPCV QGGTTAIPGA 240
  241 FGCGKTVISQ SLSKYSNSDA IIYVGCGERG NEMSEVLRDF PELTMEVEGV TTSIMKRTAL 300
  301 VANTSNMPVA AREASIYTGI TLAEYFRDMG LNVAMMADST SRWAEALREI SGRLGEMPAD 360
  361 SGYPAYLAAR LASFYERAGR VKCLGSPERE GSVTIVGAVS PPGGDFADPV TSATLGIVQV 420
  421 FWGLDKKLAQ RKHFPSINWL ISYSEYMRAL EEFYEKNYPE FVSLRTKCKE ILQEEEDLSE 480
  481 IVQLVGKASL AESDKVTLEV AKIIKDDFLQ QNGYTKYDRF CPFYKTVGML KNMIGFYDLA 540
  541 RHAVEATAQS DNKITWNVIK DSMGDLIYQL SAMKFKDPVA DGEAKIRKDY EDLAEAMANA 600
  601 FRNLED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..606] PSI-BLAST 160.0 Crystal structure of A-type ATPase catalytic subunit A from Pyrococcus horikoshii OT3


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle