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Protein Overview: rrt-2

General Information:
Name(s) found: rrt-2 / CE17479 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00004680 locus:rars-2 status:Confirmed UniProt:Q18316 protein_id:CCD66104.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 512 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: tRNA aminoacylation for protein translation [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    arginyl-tRNA aminoacylation [IEALink to PubMed article]
    translation [IEALink to PubMed article]
    Molecular Function: nucleotide binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    aminoacyl-tRNA ligase activity [IEALink to PubMed article]
    arginine-tRNA ligase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGEVCVQTL HRLRQIGSFR SIVEQKYRTV GKSQRIVVDF SSPNIAKQFH VGNLRSTLIG  60
   61 RYVDKVSRVM GNEVTSVNYL GDWGTQFAMI AAFWPQMRPS DQYWNSLSDV EKIKQLTDCY 120
  121 VVANKNMKID EEFRAKVYET FVAMEKAVTG EQENWKNDEH MMLWQQIKDI SKNHLSEFYN 180
  181 LFDVKFDKWL CESSQVRKAH QYAQELIDKG FTEDLDGKTI FRLRDIDTEK KQSDGVNYAV 240
  241 LRKSDMSSLY LTREIAAILD RDAMFQADRY LYVVDRAQRQ HFKALKVILE KIGRSDLASK 300
  301 IEHIQYGRVR GLSTRNGRTE AVGEIIEKGR ELALQFMKSS KTFCMDPAVE SDIANVLSLS 360
  361 TVVFNELKRA RNSEYEFSFQ NAFALNQNNA LALQMKHSRL SSIEEKHQHL FPQIEACTKF 420
  421 NDFDTNDDVK RLIRLLNDLE KAVELSAEKL EACQLTVQLI HVAAAAGSVQ KQLRVKDQPD 480
  481 EVAVPRLLLF SAVRNVLAEG LRFLGITPAR SM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..512] PSI-BLAST 84.0 Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  7.16276509815667 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  7.16276509815667 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  7.13957775963187 bayes_pls_golite062009
  • ligase activity
    		•  6.11211476973434 bayes_pls_golite062009
  • arginine-tRNA ligase activity
    		•  5.36436884188868 bayes_pls_golite062009
  • isoleucine-tRNA ligase activity
    		•  3.76808520367507 bayes_pls_golite062009
  • glutamate-tRNA ligase activity
    		•  2.63681738794687 bayes_pls_golite062009
  • catalytic activity
    		•  2.37674226834122 bayes_pls_golite062009
  • methionine-tRNA ligase activity
    		•  2.01261843164558 bayes_pls_golite062009
  • tyrosine-tRNA ligase activity
    		•  1.88984817882585 bayes_pls_golite062009
  • tryptophan-tRNA ligase activity
    		•  1.14187887833901 bayes_pls_golite062009
  • cysteine-tRNA ligase activity
    		•  0.844943947059557 bayes_pls_golite062009
  • binding
    		•  0.485102284225571 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.449504767632354 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.2293846471193 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.126511747475258 bayes_pls_golite062009
  • glutamine-tRNA ligase activity
    		•  0.118292082006187 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle