| Protein: | rrt-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 512 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rrt-2.
| Description | E-value | Query Range |
Subject Range |
|
|
362.0 | [0..3] | [512..83] |
|
Region A: Residues: [1-512] |
1 11 21 31 41 51
| | | | | |
1 MSGEVCVQTL HRLRQIGSFR SIVEQKYRTV GKSQRIVVDF SSPNIAKQFH VGNLRSTLIG 60
61 RYVDKVSRVM GNEVTSVNYL GDWGTQFAMI AAFWPQMRPS DQYWNSLSDV EKIKQLTDCY 120
121 VVANKNMKID EEFRAKVYET FVAMEKAVTG EQENWKNDEH MMLWQQIKDI SKNHLSEFYN 180
181 LFDVKFDKWL CESSQVRKAH QYAQELIDKG FTEDLDGKTI FRLRDIDTEK KQSDGVNYAV 240
241 LRKSDMSSLY LTREIAAILD RDAMFQADRY LYVVDRAQRQ HFKALKVILE KIGRSDLASK 300
301 IEHIQYGRVR GLSTRNGRTE AVGEIIEKGR ELALQFMKSS KTFCMDPAVE SDIANVLSLS 360
361 TVVFNELKRA RNSEYEFSFQ NAFALNQNNA LALQMKHSRL SSIEEKHQHL FPQIEACTKF 420
421 NDFDTNDDVK RLIRLLNDLE KAVELSAEKL EACQLTVQLI HVAAAAGSVQ KQLRVKDQPD 480
481 EVAVPRLLLF SAVRNVLAEG LRFLGITPAR SM
|
| Detection Method: |  |
| Confidence: | 84.0 |
| Match: | 1bs2A |
| Description: | Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 5.36436884188868 | bayes_pls_golite062009 |
| isoleucine-tRNA ligase activity | 3.76808520367507 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.63681738794687 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 2.01261843164558 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 1.14187887833901 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 0.844943947059557 | bayes_pls_golite062009 |
| binding | 0.485102284225571 | bayes_pls_golite062009 |
| nucleic acid binding | 0.449504767632354 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.2293846471193 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.126511747475258 | bayes_pls_golite062009 |
| glutamine-tRNA ligase activity | 0.118292082006187 | bayes_pls_golite062009 |
