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Protein Overview: nas-17

General Information:
Name(s) found: nas-17 / CE06076 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00003536 locus:nas-17 Zinc metalloproteinase nas-17 status:Partially_confirmed UniProt:Q21178 protein_id:CAA98501.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 448 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    astacin activity [IEALink to PubMed article]
    metallopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKYQLYKTM EDVKENHFDM FLRPSTLLLT LFLALVAGSA IRKDVDEFDS NKGKDGIVDG  60
   61 DIMLTEAQLR ILNGTAKRSK RQITKIWKKW PDAKVFYYYE NEFTSLKREL MSYAMAHISS 120
  121 NTCVKFQESN SATNRIRFTN TGGCASYIGM NGGEQTLWFG DGCLIFGTAV HEIMHSLGLF 180
  181 HTHSRFDRDN FLSVSYKDVP ENMVGNLEKE TEQTTYNAVP FEYGSTMLYR YNTFGEGTLV 240
  241 SKNEDYQKTM GLRRVSFYDL VNINVRYSCG CAKSLTCENG GYTNPSNCAT CVCPTGFAGT 300
  301 LCNEAPSNTI KLTAESYWKG YWVNFGYSTS IQTTNYYLAY LWITAPADKT IEVKIMDLSG 360
  361 FTCSYGCNYN GVEVKYMGDP RITNPLRCCA QDTEYLNQVI SSKQNPTPIV MQQRYGSSKL 420
  421 TIHYRYVDTP LSSNKKSTNG YDNYQYYV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..254] PSI-BLAST 36.221849 STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES
    2 View Details [255..315] deduced N/A No confident structure predictions are available.
    3 View Details [316..448] PSI-BLAST 22.522879 Crystal structure of the human MBL-associated protein 19 (MAp19)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  3.87713655504947 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.50720289959102 bayes_pls_golite062009
  • metallopeptidase activity
    		•  2.55317823694462 bayes_pls_golite062009
  • endopeptidase activity
    		•  2.52973705827479 bayes_pls_golite062009
  • hydrolase activity
    		•  2.30803642767787 bayes_pls_golite062009
  • metalloendopeptidase activity
    		•  1.81132179546381 bayes_pls_golite062009
  • catalytic activity
    		•  1.26162753036584 bayes_pls_golite062009
  • exopeptidase activity
    		•  0.71491631246151 bayes_pls_golite062009
  • binding
    		•  0.210557818016724 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • peptidase activity
    		•  1.72322649047672 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.759649002808058 bayes_pls_golite062009
  • hydrolase activity
    		•  0.647380592098528 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.58509255952441 bayes_pls_golite062009
  • catalytic activity
    		•  0.446188288878443 bayes_pls_golite062009
  • binding
    		•  0.00860492535308899 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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