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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: nas-17
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKYQLYKTM EDVKENHFDM FLRPSTLLLT LFLALVAGSA IRKDVDEFDS NKGKDGIVDG  60
   61 DIMLTEAQLR ILNGTAKRSK RQITKIWKKW PDAKVFYYYE NEFTSLKREL MSYAMAHISS 120
  121 NTCVKFQESN SATNRIRFTN TGGCASYIGM NGGEQTLWFG DGCLIFGTAV HEIMHSLGLF 180
  181 HTHSRFDRDN FLSVSYKDVP ENMVGNLEKE TEQTTYNAVP FEYGSTMLYR YNTFGEGTLV 240
  241 SKNEDYQKTM GLRRVSFYDL VNINVRYSCG CAKSLTCENG GYTNPSNCAT CVCPTGFAGT 300
  301 LCNEAPSNTI KLTAESYWKG YWVNFGYSTS IQTTNYYLAY LWITAPADKT IEVKIMDLSG 360
  361 FTCSYGCNYN GVEVKYMGDP RITNPLRCCA QDTEYLNQVI SSKQNPTPIV MQQRYGSSKL 420
  421 TIHYRYVDTP LSSNKKSTNG YDNYQYYV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle