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Protein Overview: rhi-1

General Information:
Name(s) found: rhi-1 / CE04595 [WormBase]
Description(s) found:
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  • WBGene00004356 locus:rhi-1 Probable rho GDP-dissociation inhibitor status:Confirmed UniProt:Q20496 protein_id:CCD63475.1 [WormBase]
  • gi|9802938|gb|AAF99947.1| Rho gdi protein 1 [Caenorhabditis elegans] [NCBI NR]
  • pir||T16379 hypothetical protein F46H6.1 - Caenorhabditis elegans [NCBI NR]
  • gi|2494705|sp|Q20496.1|GDIR_CAEEL RecName: Full=Probable rho GDP-dissociation inhibitor; Short=Rho GDI [NCBI NR]
  • gi|17569423|ref|NP_508774.1| RHo GDI family member (rhi-1) [Caenorhabditis elegans] [NCBI NR]
  • Probable rho GDP-dissociation inhibitor OS=Caenorhabditis elegans GN=rhi-1 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE04595 WBGene00004356 locus:rhi-1 rho GDP dissociation inhibitor status:Confirmed SW:Q20496 protein_id:AAF99947.1 [wormpep150.fasta]
  • 04595 WBGene00004356 locus:rhi-1 rho GDP dissociation inhibitor status:Confirmed SW:Q20496 protein_id:AAF99947.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • rho GDP dissociation inhibitor RHI-1, rho GDP dissociation inhibitor (21.9 kD) (rhi-1) [Caenorhabditis elegans]gi|9802938|gb|AAF99947.1| Rho gdi protein 1 [Caenorhabditis elegans]gi|7503614|pir||T16379 hypothetical protein F46H6.1 - Caenorhabditis elega [nrdb_11152004_Chlamydomonas]
  • locus:rhi-1 rho GDP dissociation inhibitor status:Confirmed SW:Q20496 protein_id:AAF99947.1 [wormpep115.fasta.reversed]
  • CE04595 locus:rhi-1 rho GDP dissociation inhibitor status:Partially_confirmed [wormpep80.hongbin]
  • CE04595 WBGene00004356 locus:rhi-1 rho GDP dissociation inhibitor status:Confirmed UniProt:Q20496 protein_id:AAF99947.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE04595 WBGene00004356 locus:rhi-1 rho GDP dissociation inhibitor status:Confirmed UniProt:Q20496 protein_id:AAF99947.1| [wormORF-contam.fasta]
  • Probable rho GDP-dissociation inhibitor (Rho GDI) [nr-271106-contam.fasta]
  • RHo GDI family member (rhi-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Rho gdi protein 1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE04595 WBGene00004356 locus:rhi-1 rho GDP dissociation inhibitor status:Confirmed UniProt:Q20496 protein_id:CCD63475.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE04595 WBGene00004356 locus:rhi-1 status:Confirmed UniProt:Q20496 protein_id:CCD63475.1 Probable rho GDP-dissociation inhibitor [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 191 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article][IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    Molecular Function: Rho GDP-dissociation inhibitor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDHENTGEN TSEYQYKQPP QKSIDELLNA DKEDESLKVY KAKLLGQGTV IVDEKNPLRV  60
   61 IVRSVELLIN GKTAQSFDLS DPAKLVNSDL SVSIKEGSNY RLSFAFHVQR EITSGLHYKH 120
  121 KVKRSGITVE NEKYMMGSYA PKLEIQEYKS PNEEAPSGMM HRGKYKVYSK ITDDDNNVYL 180
  181 DWQWTLHITK E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..191] PSI-BLAST 81.045757 Rho GDP-dissociation inhibitor 1, RhoGDI

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  4.21900602727099 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  3.82728537491772 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  2.79599274364249 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  2.7120102542099 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  2.70863932585459 bayes_pls_golite062009
  • potassium channel activity
    		•  2.69685666968196 bayes_pls_golite062009
  • voltage-gated potassium channel activity
    		•  2.69627305312298 bayes_pls_golite062009
  • cation channel activity
    		•  2.65302958856525 bayes_pls_golite062009
  • gated channel activity
    		•  2.52278796517374 bayes_pls_golite062009
  • transporter activity
    		•  2.46466249895824 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.37642404692102 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.37262306131842 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  2.32502571419352 bayes_pls_golite062009
  • channel activity
    		•  2.3181005726144 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  2.3181005726144 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.31677709260544 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.28077016868353 bayes_pls_golite062009
  • ion channel activity
    		•  2.2553711462771 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.23522391314947 bayes_pls_golite062009
  • binding
    		•  2.22611204798233 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.15379228421204 bayes_pls_golite062009
  • inward rectifier potassium channel activity
    		•  1.86598930407084 bayes_pls_golite062009
  • ligand-gated ion channel activity
    		•  1.81486809950722 bayes_pls_golite062009
  • ligand-gated channel activity
    		•  1.81486809950722 bayes_pls_golite062009
  • Rho GDP-dissociation inhibitor activity
    		•  1.67374100547551 bayes_pls_golite062009
  • actin filament binding
    		•  1.67203076960313 bayes_pls_golite062009
  • small GTPase regulator activity
    		•  1.55727555528218 bayes_pls_golite062009
  • protein binding
    		•  1.50286160643298 bayes_pls_golite062009
  • GTPase regulator activity
    		•  1.44225801859996 bayes_pls_golite062009
  • nucleoside-triphosphatase regulator activity
    		•  1.42486878565247 bayes_pls_golite062009
  • clathrin binding
    		•  1.23902179002817 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.12993648323166 bayes_pls_golite062009
  • signal transducer activity
    		•  1.12993648323166 bayes_pls_golite062009
  • enzyme regulator activity
    		•  1.05880190577068 bayes_pls_golite062009
  • GDP-dissociation inhibitor activity
    		•  0.580608094701522 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle