YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: vha-12

General Information:
Name(s) found: vha-12 / CE04424 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00006921 locus:vha-12 Probable V-type proton ATPase subunit B status:Confirmed UniProt:Q19626 protein_id:CCD69755.1 [WormBase]
  • pir||T34226 hypothetical protein F20B6.2 - Caenorhabditis elegans [NCBI NR]
  • gi|2493124|sp|Q19626.1|VATB_CAEEL RecName: Full=Probable V-type proton ATPase subunit B; Short=V-ATPase subunit B; AltName: Full=Vacuolar proton pump subunit B [NCBI NR]
  • gi|17570191|ref|NP_508711.1| Vacuolar H ATPase family member (vha-12) [Caenorhabditis elegans] [NCBI NR]
  • gi|1086645|gb|AAA82311.1| Vacuolar h atpase protein 12 [Caenorhabditis elegans] [NCBI NR]
  • Probable V-type proton ATPase subunit B OS=Caenorhabditis elegans GN=vha-12 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE04424 WBGene00006921 locus:vha-12 vacuolar ATP synthase (strong) status:Confirmed SW:Q19626 protein_id:AAA82311.1 [wormpep150.fasta]
  • 04424 WBGene00006921 locus:vha-12 vacuolar ATP synthase (strong) status:Confirmed SW:Q19626 protein_id:AAA82311.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • vacuolar proton ATPase, Vacuolar proton ATPase VHA-12 (54.8 kD) (vha-12) [Caenorhabditis elegans]gi|1086645|gb|AAA82311.1| Vacuolar h atpase protein 12 [Caenorhabditis elegans]gi|7499472|pir||T34226 hypothetical protein F20B6.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • locus:vha-12 vacuolar ATP synthase (strong) status:Confirmed SW:Q19626 protein_id:AAA82311.1 [wormpep115.fasta.reversed]
  • CE04424 locus:vha-12 vacuolar ATP synthase (strong) status:Confirmed [wormpep80.hongbin]
  • CE04424 WBGene00006921 locus:vha-12 vacuolar ATP synthase (strong) status:Confirmed UniProt:VATB_CAEEL protein_id:AAA82311.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE04424 WBGene00006921 locus:vha-12 vacuolar ATP synthase (strong) status:Confirmed UniProt:VATB_CAEEL protein_id:AAA82311.1| [wormORF-contam.fasta]
  • Probable vacuolar ATP synthase subunit B (V-ATPase B subunit) (Vacuolar proton pump B subunit) [nr-271106-contam.fasta]
  • Vacuolar H ATPase family member (vha-12) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Vacuolar h atpase protein 12 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE04424 WBGene00006921 locus:vha-12 vacuolar ATP synthase (strong) status:Confirmed UniProt:Q19626 protein_id:AAA82311.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE04424 WBGene00006921 locus:vha-12 vacuolar ATP synthase (strong) status:Confirmed UniProt:Q19626 protein_id:CCD69755.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE04424 WBGene00006921 locus:vha-12 status:Confirmed UniProt:Q19626 protein_id:CCD69755.1 Probable V-type proton ATPase subunit B [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 491 amino acids

    Gene Ontology:
    Cellular Component: proton-transporting two-sector ATPase complex [IEALink to PubMed article]
    bacterial-type flagellum [IEALink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: locomotion [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    determination of adult lifespan [IMPLink to PubMed article]
    protein transport [IEALink to PubMed article]
    flagellum assembly [IEALink to PubMed article]
    biosynthetic process [IEALink to PubMed article]
    ATP biosynthetic process [IEALink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    regulation of intracellular pH [IGILink to PubMed article]
    response to hypoxia [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    ciliary or flagellar motility [IEALink to PubMed article]
    protein secretion by the type III secretion system [IEALink to PubMed article]
    energy coupled proton transport, against electrochemical gradient [IEALink to PubMed article]
    ATP synthesis coupled proton transport [IEALink to PubMed article]
    Molecular Function: ATPase activity [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    proton-transporting ATPase activity, rotational mechanism [IEALink to PubMed article]
    hydrogen-exporting ATPase activity, phosphorylative mechanism [IEALink to PubMed article]
    hydrogen ion transporting ATP synthase activity, rotational mechanism [IEALink to PubMed article]
    hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVDVNQPI TGHKSAIIRN YNTNPRLIYQ TVCGVNGPLV ILNDVKFPQF SEIVKITLPD  60
   61 GSKRSGQVLE ISKNKAVVQV FEGTSGIDAK NTICEFTGDI LRTPVSEDML GRIFNGSGKP 120
  121 IDKGPPVLAE DFLDINGQPI NPWSRIYPEE MIQTGISAID VMNSIARGQK IPIFSASGLP 180
  181 HNEIAAQIVR QGGLVQLPDR PHEQTNFAIV FAAMGVNMET ARFFKQDFEE NGSMENVCLF 240
  241 LNLANDPTIE RIITPRIALT SAEFLAYQCK KHVLVVLTDM SSYAEALREV SAAREEVPGR 300
  301 RGFPGYMYTD LATIYERAGR VEGRDGSITQ IPILTMPNDD ITHPIPDLTG YITEGQIYVD 360
  361 RQLHNRLIYP PINVLPSLSR LMKSAIGEGM TREDHSDVSN QLYACYAIGK DVQAMKAVVG 420
  421 EEALSSDDLL YLEFLTKFEK NFITQGHYEN RSVFESLDIG WQLLRIFPRE MLKRIPESTL 480
  481 EKYYPRGGAK E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..491] PSI-BLAST 109.0 No description for 2c61A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle